Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0445 |
Symbol | |
ID | 2740427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 499884 |
End bp | 501164 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637159317 |
Product | amino acid permease |
Protein accession | NP_971059 |
Protein GI | 42525961 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000397922 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATA AAGGTAAATT AGGGCTTTTA AGTATTTGCC TTCTTGGAGT AAATGCCATT GTCGGTACCG GAATATTTTT GCTTCCGGGA AAGGCCGCCA AATTGGTCGG TGTATCGAGT ATCGGAGTTA TTTTATTCGA TGCCGTTTTG GTTATTTTGA TTGCACTTTG TTTTGCTGAA GCAGGAGGCT TGTTTAAAAA GAACGGCGGT CCTTATGTTT ATGCAAAAGA AGCCTTCGGC GAATTCGTCG GTTTTGAAGT AGGCTTTATG AAATGGGCAA TAATGGTTAT TGCTTGGGCT GCAATGGCTG TAGGTTTTCC CACAGCGTTA GGAAGTGTAT TTCCTTTAGC AGCAACACCT TTTTGGCGAA GCGTTATAGC CGTAGCTATT CTTTTGTTTT TAGGATTGAT GAACATTGCT GGAGTACGAA TTTCAAAAAT CGTAAACAAT GTTATTACAA TCGGAAAATT GGTGCCCCTT ATCTTCTTTA TTCTTTTAGG TATCTTTTTT ATAAAAGGCG ATAATTTTCA ACCTATGCAG TCGGTAGGTG CCTTAACTAC AACGTCTTTC GGAGCAGCTG CTCTTTTAAT CTTTTATGCC TTTACGGGGT TTGAATCTAT TGCCGTTGCC GCTGAAGATA TGGATAAGCC TGAAAAAAAT GTTCCTCTTG CTATTGTTTT GGTAATCAGC GGTGTTTCCG TTTTTTATAT ACTTATTCAA GTAGTTGCTA TAGGTATTTT GGGTGATGGA CTTACAGCAA GTGAAGCTCC TGTTGCAGAT GCTGCCGCAA AGTTTTTAGG CCCCGTTGCA AAAGCCGTTG TTACAACCGG AACCTTGGTT TCAATAGGCG GAATAAATGT TGCTTCTTCT TTCTTAGCTC CTCGAAGTGC CGTAGCTCTT GCCGACGACG GTTTTTTACC CAAGTTTGTA ACTAAAAGAA ATAAAAAAGA TGTTCCCTAC ATTTCGGTTA TTTTAACAAC CGCCTTGACA GCCTTGGTTT GCTTAACGGG CAGTTTTTCA AAACTTGCCG CAATTTCGGT TGTTTCCCGC TTTGCTCAAT ATATACCGAC CTGTCTTGCA ATCTTAGTAT TCAGAAAACG CGGTATGAAA GGCTCTTTTA GAATTCCCGG TGTTTATGTT GTTTCTTTTT TGGCGGTAGG AATAAGCCTT TGGCTTTTAT ATAATTCAAG CTGGGACAAG ATTTTATTCG GTTTAGGCGG TCTTGTAGTC GGAGCCGTTT TTTACGTTAT AATGAAACTT ACACAGAAAA AAGCTAACTA A
|
Protein sequence | MENKGKLGLL SICLLGVNAI VGTGIFLLPG KAAKLVGVSS IGVILFDAVL VILIALCFAE AGGLFKKNGG PYVYAKEAFG EFVGFEVGFM KWAIMVIAWA AMAVGFPTAL GSVFPLAATP FWRSVIAVAI LLFLGLMNIA GVRISKIVNN VITIGKLVPL IFFILLGIFF IKGDNFQPMQ SVGALTTTSF GAAALLIFYA FTGFESIAVA AEDMDKPEKN VPLAIVLVIS GVSVFYILIQ VVAIGILGDG LTASEAPVAD AAAKFLGPVA KAVVTTGTLV SIGGINVASS FLAPRSAVAL ADDGFLPKFV TKRNKKDVPY ISVILTTALT ALVCLTGSFS KLAAISVVSR FAQYIPTCLA ILVFRKRGMK GSFRIPGVYV VSFLAVGISL WLLYNSSWDK ILFGLGGLVV GAVFYVIMKL TQKKAN
|
| |