| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0437 |
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| Symbol | |
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| ID | 2740583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 492226 |
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| End bp | 493695 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637159309 |
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| Product | HEAT repeat-containing PBS lyase |
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| Protein accession | NP_971051 |
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| Protein GI | 42525953 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1413] FOG: HEAT repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000498384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCC TAAAAAAAGA ATTAAACTTT TTTTTAAAAC CCGGCGTACT AAGCCTCTTA
TTTATTTTAA GCTTCGCAGT TAAACTTGGA GCCCAAGAAA CCGCCCAGCC TCCTTCAGAA
AATAAGGCAG CTCAAGCTGA TGAAAAAAAG AAAAAAGAAG TTTCGGAATT TGAAGAAAAA
AGAGATACGA TTCTTTACGG CATAGGCGAC GATATCTTGG AACTTATAAA AAGACTAAAA
GCCGATGAAG ATGACCGCTT TGATACCGAT TTACAGAAAG TATTTGCCGA GACCAAGATT
CCTGCAATCA GAGAAGCCTT ATTTGCTTAC TTTGCCGAAA AAAAGAATGA TTGCTTAAAG
GCCGATGCCC TCATGCTCTT GGAAAATAAA GATGACGCCC CCCAAGAAAC TGTCCGTTCA
GCGATCTCCT ACATACGGGA CCTTGAGATA TATGAAGGTA TAGATTTTTT AAGGCAAATC
TTAAAAGATG AAGAAAGCGA GTACAGGGAC CTTTGTATTT CGGCAATAGG AAAGATAGGA
AAACCGGAGG ATGCCGTTTT TCTTACAGAG CTTTTTGACT CCGAGGCTTC AGATGATGAA
AAAAAATCAT TGATAATAAA GCAAAACATA ATGTTTGCAT TGGAAGATCT GCACACTCCC
GAAATATGGG ATTTTTTAAT CCGTACGGCG GAAGATTCCG ATCAAAATTC CATCATAAGA
GGTTCTGCCG TTTCAGCCCT AGGAAAAATA GGCGATGAAC GGGCTATCCC GATTTTATCC
GAAATTTTTG AAAGTAAAGA TCCGATTTTA AGAACTGCTG CTATAAAGGG TATTGCAGGC
TTTAAGGATG TAAAGGCCAA AAGCGTCCTG ACTCAAGCCT TTAAGGATTC CTATTATAAA
GTAAGGCTTC AAGCCGTTCA GTCCGCAAAA GAAGAAAAAG CCGAAGATGC CGTTCCATTT
ATTTTATACC GTGCAAAAAA AGATCCTGAA AATGTTGTAA AACTGGCCGC CATCGAAGCC
CTCTCTCATT TTAACAATGC GGAAGCAAAC GAATGGCTCA TAGATTCTTT TAATGAAGAA
AGAACGGGCT TATCCATCCG CTTAAAAATT GCCGAAAGCC TTTTAAAGAA TAACTTTGAT
GTAATTTTCG ATGATGTAAA GAAGGCTGCA TTAAAAGCTA TTTCGGACAA ACAAAAAAGC
AAATTTTCCG CAGAGCTTGG CAAGGTTATT TCAACAATCG AAAACAGAGG AACGGCGCCT
ATAGCCGAGG CCTATCTAAA CCATAAGGAT CCGATTTTTA AGAGTATAGG GCTTGATATG
TTCAAACGGA ATAAATATCC CGAGCTGGTG CCCCTTGTTT CCTTAATTGC CGAAGACGAA
AAAAACGGAG CGTTGAGCCG AAGGGCTAAA GACCTCTTAC AATCAGGTAA TACAAACAGC
GCTCAAAACA ATCAAACAGG CACTAAATAA
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| Protein sequence | MKTLKKELNF FLKPGVLSLL FILSFAVKLG AQETAQPPSE NKAAQADEKK KKEVSEFEEK
RDTILYGIGD DILELIKRLK ADEDDRFDTD LQKVFAETKI PAIREALFAY FAEKKNDCLK
ADALMLLENK DDAPQETVRS AISYIRDLEI YEGIDFLRQI LKDEESEYRD LCISAIGKIG
KPEDAVFLTE LFDSEASDDE KKSLIIKQNI MFALEDLHTP EIWDFLIRTA EDSDQNSIIR
GSAVSALGKI GDERAIPILS EIFESKDPIL RTAAIKGIAG FKDVKAKSVL TQAFKDSYYK
VRLQAVQSAK EEKAEDAVPF ILYRAKKDPE NVVKLAAIEA LSHFNNAEAN EWLIDSFNEE
RTGLSIRLKI AESLLKNNFD VIFDDVKKAA LKAISDKQKS KFSAELGKVI STIENRGTAP
IAEAYLNHKD PIFKSIGLDM FKRNKYPELV PLVSLIAEDE KNGALSRRAK DLLQSGNTNS
AQNNQTGTK
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