Gene TDE0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0428 
Symbol 
ID2739592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp484543 
End bp485283 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content29% 
IMG OID637159300 
ProductTPR domain-containing protein 
Protein accessionNP_971042 
Protein GI42525944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.562836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTATT ATGTAAATGA ACACGAAAAG GCTCTAGCTG ACTTTGATAA GGTAATTGAG 
CTTAATCCGA AAGAAGATAA AACTTATTAC TGGAAAGGAT TAGTATATGA ATATTTAAAA 
CAATACGAGA GTTCACTTGT GTATTTAAAT AAAGCTATAC AACTCAACGA TAAAAATTAC 
AAATATTATG AGCTTAGAAG CTTGGTTTAT AAACAACTCC GTGAATATGA TAAAGCCTAT 
AGCGATGTAA ATGTTGCAAT TAAATTAAAT CAAAATAATG GAATACTATA CAGTTTAAGA 
GGTCTATTAA ATAAATATTT AAATAAATAT AATGATGCAA TTATCGATTA TAACAAATCC 
ATCGAACTTA TGCCTGAGTT TATAGCACCC TACAAATCAT TACTAAGTAT ATATTTACAG 
ACTCAAAATT ATGAAGCAGG CCTTGAAGTT GCCAATAAAG CTATTAATAT TGAACAATCT 
TGGATATTAT ATAGTACAAG AGGATATCTA TTTTTAATGC TGCAATCATA TAATGAAGCA 
ATATCCGATT CTAATAGAGC AATAAAACTA AATTCAGGTT TTGCAGACTC ATATCTGACA 
AGAGGCAAAG CTTATTTAGC CCTAAAAGAA TACAAAAAAG CTATAGAAGA TTTTGATAGG 
GCTATTGAAT TGGATTCGGA CAATATTGAT AAAGTTAAAC AAGAAGCATA CGAAGCTCTA 
GCTGAAATGG GAGAAAAATA A
 
Protein sequence
MYYYVNEHEK ALADFDKVIE LNPKEDKTYY WKGLVYEYLK QYESSLVYLN KAIQLNDKNY 
KYYELRSLVY KQLREYDKAY SDVNVAIKLN QNNGILYSLR GLLNKYLNKY NDAIIDYNKS 
IELMPEFIAP YKSLLSIYLQ TQNYEAGLEV ANKAINIEQS WILYSTRGYL FLMLQSYNEA 
ISDSNRAIKL NSGFADSYLT RGKAYLALKE YKKAIEDFDR AIELDSDNID KVKQEAYEAL 
AEMGEK