Gene TDE0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0412 
Symbol 
ID2739053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp465076 
End bp466467 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content32% 
IMG OID637159284 
Producthypothetical protein 
Protein accessionNP_971026 
Protein GI42525928 
COG category 
COG ID 
TIGRFAM ID[TIGR01781] Treponema denticola clustered lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00252203 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAA ATGTAAAACC CTTATTTCCC AAAAACCTGA AGGCGAGTGG CTGGGCATTT 
GGAAGGCCGA TACAAAATAA TTTTTTAAAT TATGAAACTC TAAACATGGA GAATTCCTTA
ATGCAAAAAG ACAAATTAAA ACTCATTTTT ATCTTAATGT TAGCGGTTCT TTTATTTTCT
TGTACAAAAG AAATAAAAGA ACCGGCAGAA GAGCGGAACT CTGTAGTTAA AAATGAAGTT
ATGGAAAAGA AACCCTTATT AATACTTGAG CATACCATTC CTTCAAAAGA AGAAGATGAT
GAAGATATTG ATTTTACTGA AGAAGAACCT CCGATTGTAT TAACCGACGA AAACACTCCT
AAAACAGAGC TTATAAAATT ACTGGAAAGC AAAAAAAGAC ATGCCTGGAG TCTACATAAA
ATCCAGTTAG AAATAGATAT GTACGATGTT CATGGAAATT CGTATGAAGA GTTTGAAAAA
AGCGGTATTG ACTATCTAAA CAGACAAAAA AATACAGAGA TAGTCAAAGT TGATTCGGAT
AATAAAAATA TTTATTGTAA GCAGACATTA AACCTTCCAA GTGGAAAAGA ATTAATATAT
GATGCTGTTT ATACTTTTTA TCCATATCCG AAAAATTTTG CTTATACAAA TTATGAACTA
AGAGATAAAC CAATAATAGC ATACCGGCAT GTACCGGAAG CAAAAAGAGT ACATGGAAAA
ATAACGGAAG CTGCAAAAAA CCCAAACAAA AATAAAAATA TTAAAATATT TGAAAGATAC
ATAAATAAAT ACACTAAGGA ACATCGGCAT AAAACGGGTG ACAAACCGTA TAAGGTATTT
GATTATGTAA AAGGAAACTT CACCGGTTCA GGAAAAGATG AATATATAGT TTTGTTTACG
GCTCCTTTTA CTAAATCTGA GTTGGAAGAT GGGATATTTC TTTTGGAGTA TAGCTATATA
AAATATGTCG AGTGTTTTAT CATGGAAAAC GATAAAGTAA TTAAAATGTA TAAACTCCCG
GGGCATTGGG GGCATGTTGT ACCGAGGGAT AAAACAAAAA TAGATTTGGG CGAGCAATTT
TCTTTTGGGT GGATTGCAGA TTTTAATCAA AACGGAATAA ACGAGATATT TGTTCACCGC
AAAGAGGTAT TCGGTTCAAG TTTTTTCTCA ATAGAATTTA TTGATAATAG ATTTGTTGAA
ATACCTATCA CTAATCGAGG AGATATTCTT AAATCGGTTG ACTGGGAACA ATCTAAAATA
GTAGTTGAAA CTAATCCATT TCGGTCACTG GTATTGGATT CTAAAGATAC CAGACCTAAA
TATTTTGCAG AATATCAGTG GTGTGAAAAA GAGCATTGTT ATGTTCTTTT ATCAAATAAA
CAATATAAGT AA
 
Protein sequence
MQKNVKPLFP KNLKASGWAF GRPIQNNFLN YETLNMENSL MQKDKLKLIF ILMLAVLLFS 
CTKEIKEPAE ERNSVVKNEV MEKKPLLILE HTIPSKEEDD EDIDFTEEEP PIVLTDENTP
KTELIKLLES KKRHAWSLHK IQLEIDMYDV HGNSYEEFEK SGIDYLNRQK NTEIVKVDSD
NKNIYCKQTL NLPSGKELIY DAVYTFYPYP KNFAYTNYEL RDKPIIAYRH VPEAKRVHGK
ITEAAKNPNK NKNIKIFERY INKYTKEHRH KTGDKPYKVF DYVKGNFTGS GKDEYIVLFT
APFTKSELED GIFLLEYSYI KYVECFIMEN DKVIKMYKLP GHWGHVVPRD KTKIDLGEQF
SFGWIADFNQ NGINEIFVHR KEVFGSSFFS IEFIDNRFVE IPITNRGDIL KSVDWEQSKI
VVETNPFRSL VLDSKDTRPK YFAEYQWCEK EHCYVLLSNK QYK