| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0403 |
|---|
| Symbol | |
|---|
| ID | 2740149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 454573 |
|---|
| End bp | 455427 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637159275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971017 |
|---|
| Protein GI | 42525919 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000003324 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TATTTAAAAT AACTTTACGA AACGACTATG CTTTTAAAAG AGTCTTTGGA
GTGGAAGAAA ACAAGGACGT TTTACAGGAT TTATTGGAAT GTATCTTGGA CATTCAACCT
GAAGATATCG CAGGTTTGGA GCTCTTGGAT AAGGAGTTTC ATAAGGATTC TATAAGCGAT
AAAACCGGTG TCTTAGACGT AAAATTACGC CTAAAGAACA ACACGATTAT CGACATCGAA
ATTCAAAACA GGTGGAACAG TGAGTTTGTT CAAAGAACAA TCTTTTATTG GGCTAAAATG
TATACTGAAA ACTTAAAAAC AGGTGAAGTA TATACAAAAT TACCTAAATG TATTACAATA
AACATAGTGG GTGAAGGATT TGATTTGAAT TCACTTATCC ATAGTGAGTA CAATGTAGTA
GAAAAACACC TAAACGACAG GCTTTCCGAT GAGCTTGAAA TTCACTTTTT AAACTTAGCC
AAGGTTAAAG AACAGGATGA AAATATAGAA TCCGATGAAA AGAAAAAGAA ACTTTACAAC
TGGCTGAAAT TTATCGAAAC TGATGATGAG GAGGTACGTA ATATGCTGGC ACAAGAATCC
CCTATGATGC GGAAGGCAAA TTCCACTATT GAGTTAATGG AAATGAGCCC AAAAGAGAAG
TGGCTTTATG AAAACCGCAT GAAATATGAA CATGACAAAG CCTCGTGGAA ACATGTGGGT
TATCAAGAAG GTATTGAACA AGGCTCTTAC CAAAAAGCTC TTGAAACTGC ACGATTGATG
AAACAAGCAA ATTGTGAGCT TGACTTTATC ATACAAATGA CAGGGCTCAG TAAAGAAGAA
ATCGAAAAGT TATAA
|
|---|
| Protein sequence | MEKLFKITLR NDYAFKRVFG VEENKDVLQD LLECILDIQP EDIAGLELLD KEFHKDSISD
KTGVLDVKLR LKNNTIIDIE IQNRWNSEFV QRTIFYWAKM YTENLKTGEV YTKLPKCITI
NIVGEGFDLN SLIHSEYNVV EKHLNDRLSD ELEIHFLNLA KVKEQDENIE SDEKKKKLYN
WLKFIETDDE EVRNMLAQES PMMRKANSTI ELMEMSPKEK WLYENRMKYE HDKASWKHVG
YQEGIEQGSY QKALETARLM KQANCELDFI IQMTGLSKEE IEKL
|
|---|
| |