| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0398 |
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| Symbol | |
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| ID | 2739407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 447913 |
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| End bp | 449496 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637159270 |
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| Product | oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | NP_971012 |
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| Protein GI | 42525914 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GAATTGCAAT GCTGCTTATG GCAGCGGTCT TGATGGTTAC TGTATTGGTA
ATTTCATGCA GTAAGGATGA GGCAGAAATG GGAACCGGTG GAAAAACAAC GGAAAAAACT
ACCCTCATTG TAGGAGCAGG CGGAGATCCG ATGAGTTGGA ATCCGGACAG CTTGCCCGAT
GACAACGGGT ATCCGATTTT CCAAAATATA TTCAATCGGT TGGTCAAATT GGACGCATCA
AAAAATATTA TACCCGATTT GGCCGAATCG TGGGATATTT CACCCGACGG AAAAGAGATA
ACGTTTTATC TTCACACGGC TGAATGGCAT GACGGAAAAC CTGTAACGGC CGATGATGTA
AAATACACAT TTGATTATAT TGCAAAGAAA AATACATACT TGTTATATTC ACGGCTTCAA
ATTATTGACG AAATAGTTGT AAAAGACAGT AAGACAGTTG TGTTTAAATT AAAAGTTCCT
GATGTATCGC TTGTGGCAAA TCTCGGCTGG TATGCGTCAT TTGTTCTCCC GAAGCATATT
TTTGATAACG GACAGGAATG GGAAGATAAT ATTGCAGCCA AAGAAAAGCC GATAGGTTCG
GGGCCCTTTA AACTCTTAAA ATTTAAACAA GGGGAATCGG TTACACTTGA AGCAAATAAA
AACTATTTTA TGGGAGCCCC GAAAATAGAC AATGTAATTT TTACAATAAT TCCCGATAGT
GCTACAGCAG TACAAGCTCT TGTAAACGGC GAAATAGATG TATTGGAAAA TATACCGGCA
GCAAATAATA GAGAACTTTT AGCAAATCCT CAGCTTAGAC TGGTATTCAA TGAATATCCG
TCGCCGATGA GAATTATCTT TAATATGCGG AATGAAAAAG TTAAGGATGT AAATTTAAGA
AGGGCGATTG CAAGTGCAAT AAATAAAAAA GAAATTTCCG ATAAAATTTT CGACGGAGTA
CAAAAGCCTG AATATGCTAT GTATCCTCAA TTTATAAAAT GGGTAAGCAA TACGGAAAAT
GTATCTCCTC AATTTAACAT TGATGCCGCA AGAAAAATTT TACAGGATGC CGGATACAAG
GCTGATAAAG ACGGATTTTT TGTACGCGGT TTGCAAATAG AAGTTTTTGA GGGAGGAGGA
TATCCCGATG CTGCAAAATT AATGCAGGCA ACACTTGCAA AAGCCGGTAT TGAATTAAAG
GTAAACGTAT CTGAATATAA TGCATGGTCG GATAAAGTAG GGGCAAATAG AGATTTTATG
CTGGAACTAC AAGGCGGCTT TATGGGGCCT GATCCGGCAG CTCTTTATTC CAGATATGGT
ACTGATGAAT CAAATAATTG GAGCGGGTAT TCCAATATAA AGTTTGATGA GCTATGTAAA
AAAGGTTTGA CTGTAGGTAA TAAAGAAGAA CGAGCTGCAA TTTATAAAGA AGCCCAAAAA
ATTTTAGCCG AAGATTTACC TTTTATTCCT ATAGTAGGGT TTGCATCCTA CGATGCAAAT
TCAGTAAATT TTAAAAATTT ACCTATAGAC GGAACAGGAA AATGGGGTTG GCAAGAATAT
ACATTTACTG AAAAAGTGAA ATAA
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| Protein sequence | MKKRIAMLLM AAVLMVTVLV ISCSKDEAEM GTGGKTTEKT TLIVGAGGDP MSWNPDSLPD
DNGYPIFQNI FNRLVKLDAS KNIIPDLAES WDISPDGKEI TFYLHTAEWH DGKPVTADDV
KYTFDYIAKK NTYLLYSRLQ IIDEIVVKDS KTVVFKLKVP DVSLVANLGW YASFVLPKHI
FDNGQEWEDN IAAKEKPIGS GPFKLLKFKQ GESVTLEANK NYFMGAPKID NVIFTIIPDS
ATAVQALVNG EIDVLENIPA ANNRELLANP QLRLVFNEYP SPMRIIFNMR NEKVKDVNLR
RAIASAINKK EISDKIFDGV QKPEYAMYPQ FIKWVSNTEN VSPQFNIDAA RKILQDAGYK
ADKDGFFVRG LQIEVFEGGG YPDAAKLMQA TLAKAGIELK VNVSEYNAWS DKVGANRDFM
LELQGGFMGP DPAALYSRYG TDESNNWSGY SNIKFDELCK KGLTVGNKEE RAAIYKEAQK
ILAEDLPFIP IVGFASYDAN SVNFKNLPID GTGKWGWQEY TFTEKVK
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