| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0392 |
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| Symbol | |
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| ID | 2740324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 441936 |
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| End bp | 443114 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637159264 |
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| Product | (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative |
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| Protein accession | NP_971006 |
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| Protein GI | 42525908 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATGA ACAATTTGCC TAAGGGCTTT GACAGCTTGG CTGAAGCTCA GCAGAAAAAA
TTTTTAGCTT TAAAAAGTTT AAAAGATGGA GGCGGCAAGG TTATCGGCCT TTACTGTTCC
TATGTACCTA CCGAACTTGT ATATGCAGCC GGGGCCGTTC CCGTTTCTTT ATGTGCAACA
AGTGAAAAGC CCATAAGTGC AGCCGAGAGA GATTTACCTA AGAACCTATG TCCTCTTATA
AAAGCTTCTT ACGGACATGC CATAACCGAC ACCTGTCCGT TCTTTTATTT TTCTGATTTT
ATTGTGGGAG AAACTACCTG TGACGGCAAA AAAAAGATGT TCGAACTTTT AAACGATATA
AAGCCGACCT ATGTGATGCA TCTTCCTCAA AATAACCTTG ATCCGAAGGC ATACCCCTTT
TGGGCTGATG AGGTAAAAAA GCTAAAAGAA AGAATCGAGG AATTTTATAA CATAACAATA
ACCGAAGACG ATTTAAGACA GGCTATAAAG GACTGCAATC AGGAAAGAAG AAACCTTGTA
AATTTCTTTG AACTTTCAGC CCTAGACCCT TCTCCTGTTT CAGGCTTGGA ACAGTTTAAT
GTAAAAGAAG CCTTCGGTTT TCAATACGAT ATACAGCAGA AAAATGCCGA GATAGTAAAA
CGCACAAAAG AATTAAAAGA ATATTGGGAA AAGAATTTAA AAGGCACAAG GGATGAACGG
CCGAGGATTT TAGTTACGGG CTGCCCCTTG GGAGGCGTAA AAGAAAAAAT TTTGGCACAG
ATTGAAAAAC TGGGAGCTGT AATCGTAGGT TATGACAGCT GTTCGGGTTT ACGCACCCAC
ATGGAATTTG TAGACGAAGA CCCAGCAAGA GATCCGATTG AGGCTATTGC CGAAAAGTAT
CTTAAAACAA ACTGTTCCGT TATGAGTCCA AATCCCGGAA GGCTCAAGGA TTTGGATTAT
CTTTTAGATC ACTACAAGGC TGATGCCGTA ATCGAATGTA CCTTGGTTGC CTGCCACACC
TTCAACCTTG AAGCTCATAC TGTCGGAAAA CACATCATGC AAAAAGGACT TCCCTATATT
CACATAGAAT CGGATTATTC GCAAGAAGAT GCGGGACAAT TTGCAACAAG ACTTGAAGCC
TTTTTGGAAG TTGTTTCAGA AAGGAAAAAA CTAAAATGA
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| Protein sequence | MIMNNLPKGF DSLAEAQQKK FLALKSLKDG GGKVIGLYCS YVPTELVYAA GAVPVSLCAT
SEKPISAAER DLPKNLCPLI KASYGHAITD TCPFFYFSDF IVGETTCDGK KKMFELLNDI
KPTYVMHLPQ NNLDPKAYPF WADEVKKLKE RIEEFYNITI TEDDLRQAIK DCNQERRNLV
NFFELSALDP SPVSGLEQFN VKEAFGFQYD IQQKNAEIVK RTKELKEYWE KNLKGTRDER
PRILVTGCPL GGVKEKILAQ IEKLGAVIVG YDSCSGLRTH MEFVDEDPAR DPIEAIAEKY
LKTNCSVMSP NPGRLKDLDY LLDHYKADAV IECTLVACHT FNLEAHTVGK HIMQKGLPYI
HIESDYSQED AGQFATRLEA FLEVVSERKK LK
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