| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0387 |
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| Symbol | hgdC |
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| ID | 2740319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 438567 |
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| End bp | 439316 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637159259 |
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| Product | (R)-hydroxyglutaryl-CoA dehydratase activator |
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| Protein accession | NP_971001 |
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| Protein GI | 42525903 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) |
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| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000890821 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACTACA TAGGAATTGA TATCGGTTCA ACGGCAACCA AGACCGTCAT TATGGATGAA
AATAAAAAAA ATATCCTTTA TAAAAACCGT ATACCCAGCG GGTGGAACAG CAAGGAAACG
GGAGAGGCTG TCTTGGACTG GATAAAGGAG ACCTTGCAAA ATAAGGACTT TAAAATAACC
GCCACAGGTT ATGGAAGAGT GAGCGTTCCT TTTGCTGACA AAACCTTAAC CGAAATTTCC
TGCCACGGAA AGGGGGCTCA CTTTTTGGCA AAAAAAGATG TAACCGTAAT TGATATCGGC
GGGCAGGATA CAAAAGTCAT TCTTGTAAAG GACGGGCTTG TAATTGACTT TATCATGAAC
GATAAGTGTT CGGCCGGTAC GGGTAAATTT TTGGAGTTAA TGGCAAACAG GCTGGGCTTG
AGCTTACAGG AAATAAGCGA GTACGCAGCG CGCGGAAAGG ATTTAAATCT TTCTTCCGTA
TGTACTGTCT TTGCCGAATC TGAAGTAACC TCCCTCATGG GAAAGGGAAG CCCCCGCGAA
GATATTGCAA GGGGCGTTAT CAATCAAATA GTTTCAAAAG TAGTTTCGTT AGCAAACAGA
AAACCGCGCT CCGATCTATA TTTTTTAACC GGCGGCTTTA GTTCAAACGA TTATATAATA
GAAGAAATCT CAAAAAAACT TGAAGCCTCC GTGTTATCGG ATGACTTGGG GGTCTTTGCC
GGAGCAATAG GAGCCTGTAT ATTATCATGA
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| Protein sequence | MHYIGIDIGS TATKTVIMDE NKKNILYKNR IPSGWNSKET GEAVLDWIKE TLQNKDFKIT
ATGYGRVSVP FADKTLTEIS CHGKGAHFLA KKDVTVIDIG GQDTKVILVK DGLVIDFIMN
DKCSAGTGKF LELMANRLGL SLQEISEYAA RGKDLNLSSV CTVFAESEVT SLMGKGSPRE
DIARGVINQI VSKVVSLANR KPRSDLYFLT GGFSSNDYII EEISKKLEAS VLSDDLGVFA
GAIGACILS
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