Gene TDE0375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0375 
Symbol 
ID2739468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp429287 
End bp430237 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content32% 
IMG OID637159247 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_970989 
Protein GI42525891 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTGG AATTAACAAA CCTAACAAAA ACATATAAAG AAAAAAATGC GGTAAAAAAT 
ATAAGCTTTA ACCTTGAAAA AGGAAAGCTC CTCTGTCTTT TAGGACCGTC CGGCTGCGGA 
AAAAGTACGG TATTAAAATC GATAGGAGGT TTTTTAAAAC CTGACAGCGG AAAAATAATT 
CTTGACGGCA AAGAAATTAC AAATGACCCG CCTGAAAATA GAAATGTTTC TACCGTTTTT 
CAATCCTATG GGCTTTTTCC TCACATGAAT GTTTTATCGA ATATTATTTA CGGTTTAAAA 
TTTAAAAAGA TGCCTAAGGC TGAACGAGTT GAAGCCGGAA TGAAGATGAT AAAAACAATG 
GGCTTATCTG GTTATGAAAA AAAACACATA AGCGAACTTT CAGGCGGAGA ACAGCAGAGG 
GTTGCTCTTG CACGCAGTTT GATTATAAGG CCTAAGCTTC TTTTGTTGGA CGAACCTTTA 
AGCAACTTGG ATGCAAAGCT TAGAATCAAT ATGCGTAAAG AAATAAAACA AATTCAAAAA 
GAATTTAATA TCACTACAAT TTTTGTTACC CATGATCAAA GCGAAGCATT TGAAATTGCC 
GATAAAATTA TTTTGATGAA TAATGGAGAA ATTATTCAGG AAGGAACGGC TGAATCTCTT 
TATAATCAAC CTGCAAGCGA ATTTGCTCTT GACTTTATCG GTACAAACAA TAAAATAGAA 
AATTCATATA TCAGGCCTGA AAAGATAAAA GTATTTAAAT CTTTACCGGA AGAAAATATG 
GGAAATTTTG AAGAAGCCCA AATTATCAAT ATTATTTTTA AGGGCGAAAT AATAGAACTC 
TTTCTTAAAA CTAAAGAAAA AGAATTAAAG GCCATTGTTT TAAACAATGA CTGCAATTAT 
CAAAAGAATG AAAGAGTTTA TATTACCTAT ATTAAGGAGA ATTTAAATTG A
 
Protein sequence
MYLELTNLTK TYKEKNAVKN ISFNLEKGKL LCLLGPSGCG KSTVLKSIGG FLKPDSGKII 
LDGKEITNDP PENRNVSTVF QSYGLFPHMN VLSNIIYGLK FKKMPKAERV EAGMKMIKTM 
GLSGYEKKHI SELSGGEQQR VALARSLIIR PKLLLLDEPL SNLDAKLRIN MRKEIKQIQK 
EFNITTIFVT HDQSEAFEIA DKIILMNNGE IIQEGTAESL YNQPASEFAL DFIGTNNKIE 
NSYIRPEKIK VFKSLPEENM GNFEEAQIIN IIFKGEIIEL FLKTKEKELK AIVLNNDCNY 
QKNERVYITY IKENLN