Gene TDE0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0373 
Symbol 
ID2740125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp426241 
End bp427812 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content30% 
IMG OID637159245 
ProductABC transporter, ATP-binding/permease protein 
Protein accessionNP_970987 
Protein GI42525889 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTTCA TATTGATTTT TATTCTTAAA ACCATCCAAA CGGCAGCCTC AACAGGTATT 
TTGTATTTTT TTGGGTTCGC TATCGATAAA TTTACAAACG ATCCTTCTCC GGAAAAAATT
AAACTCATTA TATTCTATGC TCTGCTTGAA GTCCTTTTTG TAGTCATTCA TCACCTATGT
CAACGGGGTG TATTTTTTAT ACGCAAGAAA TTTGCTCTTC TTTATAGTCA AAATCTTTCA
GACGCTATTT TTGACATTCC TCCTGAAGAT TTTTTAAAGC ATGAAACGGA TTATTATTTT
ACCGCATTTA AAGATCAAAT ACCTAAAATA CAAACCTCAT ATTTACTTGG ACGCATTAAT
ATCGCTTCAA GTTTTGTAGG AATTTTGTTG ACGGTCTTTG TTTTGATATC ATTCCATTTT
AGTTTACCGA TTATTATGCT TTCGTCTTTT GTAATAGGGA AATTAGTTAC AAAAATCATC
GAGCCTCACA TTGACAAAAT CTCTTCTCAA GAAATTACTC TGCAAGAAGA ATATAACGCC
AAAACAACCG AAAATCAAAG AGGTCTTCCC TTCTATATTT TAAACGGAAA AAGAAATCTG
CTTTTTACCC GTCAAGTAAG CGCAAATAAT ACATTCGAAA ATCAAAGCTG CAAAATAGAA
ATTAAGAAAA CGGCTTTTGA ATGGATAATG ATTTTAACCT CAATGTTTTT AGCGGCAGCC
GGATTAGCAT TTGCAATTTT TTTGTTTACA AAAAACAAAA TAACAATAGG TATGTTGAGC
TCTACAATCT TATATATGAA TGTTTTTTCG CAAAAGCTTG AAGGGCTGCT TAATCTTTTT
ATTGAAGTGC GTTACGGAAA AACGAGCAAA GAAAAAATAG ACGGGATCAT AAAAAGTAGA
AAAAATAAAA TTTTATCTAC AAAGGAATTT CAGATTCTTA AATTCAAAGA TGTTTCTTTT
TCATATAACA CAAAAGACGG AGAAAATATT TCCATTTTAA AAAATATAAG TTTACAAATC
AACAAGGGTG ATAAAATATT ATTAACGGGA AAAAGCGGCA GTGGAAAATC TACTTTGATA
AAAATTGCCT TAAATTTATT AAAACCCGAT ACCGGTAAAG TATATTTTAA CAATGAGGAA
ATTTCAGATA ACGAATATCC GCCGTTTTAT TTTATTAATC AAAACTTTCA TCTTTTTAAA
ACATCGATTG AAGATAATAT TTTCTTTGGA GATAAAAAAC AAAAAGAACC TTATGAATTT
GCACGGCTTG AAAAATTTTA CGATAAGGAT ATAAGCGCAT TAGATACTGA CGGAATGCAA
ATATCCGGAG GAGAAAAAGA ACGCACCGCA TTAGCTCGGG TTTTTGCAGG TTCATATAAA
AATATAATTA TGGATGAAAC CTTTGCAGGT CTTGACTTTG AAAATTATAA ATTTATTCAA
AACAAATTTT TGGATGACAA GGAATTGACA TATATTGAAA TTTCTCATCG TGAAATTGAT
ACCGAAAAAT TTGATTATAT ATTTAATCTG GATGAAGGAA AATTAAATGT TAAAACTGTT
AAAGAAAAAT AA
 
Protein sequence
MYFILIFILK TIQTAASTGI LYFFGFAIDK FTNDPSPEKI KLIIFYALLE VLFVVIHHLC 
QRGVFFIRKK FALLYSQNLS DAIFDIPPED FLKHETDYYF TAFKDQIPKI QTSYLLGRIN
IASSFVGILL TVFVLISFHF SLPIIMLSSF VIGKLVTKII EPHIDKISSQ EITLQEEYNA
KTTENQRGLP FYILNGKRNL LFTRQVSANN TFENQSCKIE IKKTAFEWIM ILTSMFLAAA
GLAFAIFLFT KNKITIGMLS STILYMNVFS QKLEGLLNLF IEVRYGKTSK EKIDGIIKSR
KNKILSTKEF QILKFKDVSF SYNTKDGENI SILKNISLQI NKGDKILLTG KSGSGKSTLI
KIALNLLKPD TGKVYFNNEE ISDNEYPPFY FINQNFHLFK TSIEDNIFFG DKKQKEPYEF
ARLEKFYDKD ISALDTDGMQ ISGGEKERTA LARVFAGSYK NIIMDETFAG LDFENYKFIQ
NKFLDDKELT YIEISHREID TEKFDYIFNL DEGKLNVKTV KEK