Gene TDE0359 details

Gene Information

• Locus tag: TDE0359
• ID: 2741079
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 402283
• End bp: 404190
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637159231
• Product: ABC transporter, ATP-binding/permease protein
• Protein accession: NP_970973
• Protein GI: 42525875
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.101068
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCCA TTAACACAGC AAAACCGGAA ATGAAGCTTT CCATGCCGGC CGTCAAACGG 
CTTCTTTCCT ACCTTAAACA ATATAAAACC GTTCTTGCGG TTGTTACGGT CTGTATTTTA 
TTAAGTGCAG GAGCAACCGC ATCAGCAGCT TTGTTCCTGC AAGTATTGAT TGACCGGTAT 
ATTATGCCGC TGCTTGCGCA AAGCACTCCG GTGTTTAGCG GACTTTTACG GGTGCTCATC 
TTTATGGCGG CGATTTACGG CACCGGTGTT CTCTGTTCGT GGATTTATAA CCGCTTGATG 
ATTAAGGTTG CACAGCAGAC TCTCAAGCGG ATTCGAGATG AAATGTTCTC TAAGATGCAG 
CGCTTCCCTC TCCGATATTT TGACACACAT ACCCACGGAG ATATTATGAG CCGTTACACC 
AATGATACCG ACACACTCCG GCAGATGATT ACACAGTCGA TGCCTCAGCT GGTTTCTTCT 
ATGTGTACGG TTGTTACAGT TTTCTTTGCA ATGCTGTATC AGAGCGTGTA TCTTACGATT 
ATCGTTGTAG CTTCCATCTT TTCTATTTTA AAAGTGATTA AGTTTATCGC AAAAAAAAGC 
GGCTTTTATT TTGTACGGCA GCAGGAAACG CTCGGACAGC TGAACGGTTA TGTTGAAGAG 
ATGATAAACG GGCAGAAGGT AATTAAAGTG TTCTGCCGCG AAGAAGCGGT CAAAGCCGAT 
TTTCATGAAA AAAATGCCGC ATGGCAGGAA AGCGCCTCAA AGGCAAACTC CTATGCGAAT 
ATCATCATGC CCTTTATGAA TGCACTCGGC TATTTTCAAT ATGTGATTGT CGCCCTTGTC 
GGCGCATGGT TCGCAATTGC AAAAATCCCC AATCCGACTA TTGCCGGTAT CAATACGCTG 
ACACTCGGTA CCATCGCTTC GTTTTTAACA TTGTCGAGGA ATTTTACCAA TCCTATTTCT 
CAGCTTTCCA ATCAGCTCAA TTCGGTTATC AATGCCGTTG CAGGGGCATC GCGGATTTTT 
GCTCTGATGG ACGAAGAACC CGAAGAGGAT GCCGGAACCG TTATGCTCGT AAATGCACGG 
GAAGAAGCCG GTACACTGAC CGAAGCTGTG GAGCACACCG GGGTATGGGC TTGGAAGGGA 
ATGCACGAGG ACGGCAGCAT TACATTGACA AGGCTGACAG GCAAGGTGAT TTTTGAGCAT 
GTCGATTTCG GGTACTCGCC CGATAAAAAG GTACTGAAGG ACATAAACCT TTTTGCAGAG 
CGGGGACAGA AGGTCGCATT TGTCGGGGCA ACAGGCGCGG GCAAAACAAC GATTACCAAT 
TTGATCAACC GCTTTTATGA TATTAACAAA GGAACTATCA CCTATGACGG AATACCGATT 
ACCCGGATCA GGAAAGAAGA CCTGCGCAGG TCACTCGGTA TCGTATTGCA AGAGGTTAAT 
TTATTTACCG GCACCATTAT GGAAAATATC CGTTTCGGCA ACTTGGATGC AACCGACGAG 
CAGTGTATCG AAGCGGCAAA ACTTGCCAAT GCTCACAATT TTATTACAAT GCTTCCACAT 
GGTTATGACA CGGTTATTGA AGGAAATAAA AACTCTCTTT CACAAGGGCA GCGCCAGCTA 
TTGTCCATCG CCCGTGCCGC AGTCTCCGAC CCGCCCGTCA TGATTTTGGA CGAAGCGACA 
TCCTCAATCG ACACCCGAAC CGAAGCACTT ATCCAAAAAG GTATGGATAG CCTGATGGAA 
GGCCGAACCG TTTTCGTCAT CGCTCACCGT CTTTCCACTG TTATGAATTC CGACGTTATC 
ATGGTCTTGG ATCACGGTGA AATTATCGAG CGCGGCACAC ACACCTCCCT GCTGGAGAAA 
AAGGGAGTGT ACTACCGACT CTATACCGGA GCTTTTGAGC TCGACTAA 

 

Protein sequence

MKPINTAKPE MKLSMPAVKR LLSYLKQYKT VLAVVTVCIL LSAGATASAA LFLQVLIDRY 
IMPLLAQSTP VFSGLLRVLI FMAAIYGTGV LCSWIYNRLM IKVAQQTLKR IRDEMFSKMQ 
RFPLRYFDTH THGDIMSRYT NDTDTLRQMI TQSMPQLVSS MCTVVTVFFA MLYQSVYLTI 
IVVASIFSIL KVIKFIAKKS GFYFVRQQET LGQLNGYVEE MINGQKVIKV FCREEAVKAD 
FHEKNAAWQE SASKANSYAN IIMPFMNALG YFQYVIVALV GAWFAIAKIP NPTIAGINTL 
TLGTIASFLT LSRNFTNPIS QLSNQLNSVI NAVAGASRIF ALMDEEPEED AGTVMLVNAR 
EEAGTLTEAV EHTGVWAWKG MHEDGSITLT RLTGKVIFEH VDFGYSPDKK VLKDINLFAE 
RGQKVAFVGA TGAGKTTITN LINRFYDINK GTITYDGIPI TRIRKEDLRR SLGIVLQEVN 
LFTGTIMENI RFGNLDATDE QCIEAAKLAN AHNFITMLPH GYDTVIEGNK NSLSQGQRQL 
LSIARAAVSD PPVMILDEAT SSIDTRTEAL IQKGMDSLME GRTVFVIAHR LSTVMNSDVI 
MVLDHGEIIE RGTHTSLLEK KGVYYRLYTG AFELD