| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0351 |
|---|
| Symbol | ldh |
|---|
| ID | 2740158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 395141 |
|---|
| End bp | 396088 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637159223 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | NP_970965 |
|---|
| Protein GI | 42525867 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAA AGAAACGCAA AGTTACCGTT GTGGGAGCAG GTGCGGTCGG TTCAACCTTT
GCCTACGCAT TGGCTCAAAG CGGTTATGCG GATGAAATTG CAATAACCGA TATGAATAAA
AATTTTGCCG AAGGACAAGC TCTCGACCTT GTACAGGGTC TGCCTTTTTT ACCGCAAGTC
GACATACACG CGGGCGATAA AACCGATTAT GCCGACAGCG ACATCGTTGT GGTTACGGCG
GGAGCAAAAC AACAGAGCGG GGAAACGCGC ATAGATTTGC TGAAACGCAA TGCATCCATT
ATCACCGGCA TTGCAAAGGA CATTGCGGAA AGCGGCTGCA GCGGCGTTAT GCTGATTGTG
AGCAATCCCG TTGATATTTT AACTCGGGCG GCGCTCAAGG CTTCCGGATG GGAGCGCGGA
AGAGTTATCG GTTCCGGTAC GGTTTTGGAC ACTGCACGTT TCCGCTACAC TCTTAGCAAA
GAGTGCGGTG TCGATGCGCG CAACATTCAC GGTTATATTT TGGGAGAACA CGGCGACAGC
GAATTTGCGG CTTGGTCGAT GACATCCGTT GCAGGACGGC GCATCGACGA ATATTGTTCA
GGCGGTGTGT GCAGCTCAGG CCCGCACTTC GATAAAGCAA AAATTCTGGA AGAAGTACGG
AATTCCGCTT ACCACATTAT CGACTACAAA GGCTCTACTT ATTTTGCCGT CGGCTTAGCC
CTGACGAGAA TAGCCGGCGC CATTTTGCGC AACGAGCACA GCATTTTGTC CGTATCGATG
ACCTTGGATG GAGAGTTCGG ACTTAAAGAC GTATGCTTGA GCGTTCCCTG CATTGTTGGA
CGCAGCGGTG CGGAACGGGT TATAGAAAGC GATCTTCCCG CTGATGAACA GGCAGCATTG
GAAGCAAGCG CAAAACGGCT TAAAGAAGCT TTTACCGAGA TGAATTAA
|
|---|
| Protein sequence | MDEKKRKVTV VGAGAVGSTF AYALAQSGYA DEIAITDMNK NFAEGQALDL VQGLPFLPQV
DIHAGDKTDY ADSDIVVVTA GAKQQSGETR IDLLKRNASI ITGIAKDIAE SGCSGVMLIV
SNPVDILTRA ALKASGWERG RVIGSGTVLD TARFRYTLSK ECGVDARNIH GYILGEHGDS
EFAAWSMTSV AGRRIDEYCS GGVCSSGPHF DKAKILEEVR NSAYHIIDYK GSTYFAVGLA
LTRIAGAILR NEHSILSVSM TLDGEFGLKD VCLSVPCIVG RSGAERVIES DLPADEQAAL
EASAKRLKEA FTEMN
|
|---|
| |