Gene TDE0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0348 
Symbol 
ID2741244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp390597 
End bp391193 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content35% 
IMG OID637159220 
ProductTetR family transcriptional regulator 
Protein accessionNP_970962 
Protein GI42525864 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG CATTTACCGA ACAAGAAAGA ATCAAAATAA AAGAAAAGAT ATTGGAAGCG 
GCACTGGAGC TATTTCACGA TAAGGGGACG AAGGCGCTGA GTATAGCTGA ATTGACGAAG 
CGGGCAGGTA TTGCGCAGGG AAGCTTTTAT AATTTTTGGA AAGATAAAGA GGCCTTGATT 
ATGGAACTCA TTGCATACCG ATCAAGCCAA AAATTAAATT ATATTGAAAA AAAATTTTCG 
AATTCTCTCT CCGATCCGGC AAAATTTCTT ACCGACATAA TATACCGATA CTCGGTTGAT 
CTTATGGTAA AAATGCAAAA GCAGCCTGTG TATGAAGATG CCTTCAAAAT ACTTGAAGCA 
AAAAATCGGA ATGAAGTTCA TAGGATTGAA AGTCTATATG ATGACTTTTT AACGAAGCTC 
ATAGAATATT GGGAGCAAAA CGGTTCGATT AAGCGGGCAG ATAAAAAAGG CTTATTGAAT 
GCGTTTAGCG GGAGTTTTTT ATTATGTTCT CATTATTATC AATTTGATAA AGAGTATTTT 
AATGAAATGC TGCTGACATT TATATCCGGA ATAGTAAATA AGTATATAGA AAAATAA
 
Protein sequence
MAKAFTEQER IKIKEKILEA ALELFHDKGT KALSIAELTK RAGIAQGSFY NFWKDKEALI 
MELIAYRSSQ KLNYIEKKFS NSLSDPAKFL TDIIYRYSVD LMVKMQKQPV YEDAFKILEA 
KNRNEVHRIE SLYDDFLTKL IEYWEQNGSI KRADKKGLLN AFSGSFLLCS HYYQFDKEYF 
NEMLLTFISG IVNKYIEK