Gene TDE0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0339 
Symbol 
ID2739338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp378011 
End bp378628 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content44% 
IMG OID637159211 
ProductTetR family transcriptional regulator 
Protein accessionNP_970953 
Protein GI42525855 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA GTGAAGATAC CAAACAATTG ATTTTGGATA CGGCTAAGCG GGAGTTTTTG 
GAAAAAGGCT ATAACGCAGC CTCTGTCCGC ACGATTGCAA AGAAAGCAGG CTTAACGACC 
GGTGCAATTT TTCGGTATTA CGCGGATAAG GCAGCTTTGT TTGAAGCCCT TGTTTCCGAA 
GCGGCAGACG GCTTGGTCGA GCAATTTAAG GCAGCCCAAG AGGCGCACTT TGAGTTAATT 
CCCCAAGAAC GGACATCAGA AAGCCGAGAT TTATCGACAG AATATTTACG GCACTTTGTA 
AACTACGTAT ATGACCGTTT TGACGAATTT AAGCTGGTGC TTTGCGGAGC GGAAGGCACG 
AAATACGCAA ACTATATCCA TGATCTGGTG GAACTTGATG TGGCACGCAC CGAAACATAT 
TACCGGCTCT TGCGGGAAAA GGGAAAAATC AAAGGGAGCA TCAGCCTTGA ACTTCATCAC 
ATGATTACAA GTGCCTATTT TACCGCAGTA TTTGAAACCG TCGTACATGA TATGCCAAGA 
GAACAGGCTA TGGGATATGT AGAAGAAATC GCCGTTTTCT TTAATTCGGG ATGGGATGGG 
CTTTTAAAGC TGATATAA
 
Protein sequence
MSKSEDTKQL ILDTAKREFL EKGYNAASVR TIAKKAGLTT GAIFRYYADK AALFEALVSE 
AADGLVEQFK AAQEAHFELI PQERTSESRD LSTEYLRHFV NYVYDRFDEF KLVLCGAEGT 
KYANYIHDLV ELDVARTETY YRLLREKGKI KGSISLELHH MITSAYFTAV FETVVHDMPR 
EQAMGYVEEI AVFFNSGWDG LLKLI