Gene TDE0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0336 
Symbol 
ID2739335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp375283 
End bp376401 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content34% 
IMG OID637159208 
Producthypothetical protein 
Protein accessionNP_970950 
Protein GI42525852 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000639163 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAG AAAATAAACA CAGGCTTCAA ACTATTTCGT TCTTCGTATT ACTTGCAGGA 
ATGTTGATTC TTGTGGGTAA ATTATTTTTG CCCTACGCAA GCGTTTTATT ATGGTCGGCA 
GTAATTTATG TTTTGGTAAG GCCCTTATAT AATAAGATAC TATCCAGGAT GAATAAAGAG 
AAAAAGACTT TCCCGATAAA AAAAAGATTG CTTGCAGGCA GTTTTGCAAT AATAACGGTT 
CTAGTTGTTG CCGGTGTTTT GTTTTTTGTT GTGATAAAAA TATTCGGGCA AGGGAAAATC 
CTTGTTCAAA ATATTCAGAG CTTTTTAGAA AACATAAATA ATTCTGAATC GGGCTTTTCA 
AAAACCGATA TAGCCGCAAT TGTAAACCGC TTATCTATGG GGACGGTGGA TATTTCCAAT 
CTTGATTTGC AAAAAGAATT TTTAAACCTT TTATCTTCTT CTTCTGATAA AATATTGCGG 
TATGCAACAA GCCTTGTAAA AAATGCCGGT TCGTTTTTTT TGTCTCTTGT TTTCTTTGCC 
TTTGCCCTTT ACTTTTTTTA TGTAGACGGA GCCTATCTTT TCAGTTTATT AAAACATGCC 
ATTCCTATAG ATAATGAAAC ATCAGACAAA CTTTTTTCTA AAATAGGCGA AATTACAACC 
AATCTTTTTA AGGGACTTTT TTTGGTTTCG TTTTACCAAT GCCTTGCATC TTTTATAGTT 
TATCTTATAT TCGGTGTGCA AAGCGCTCTC TTGCTTGCAA TTCTAACCTT TTTTAGCACA 
TTTTTACCCA TTGTCGGCTG CGGTCTAATT TGGTTTCCTG TAGGTGTCGG ACTATGCTTT 
ACGGACGGGC TTGTAAAGGG CCTTATCTTT TTGGTTGTTG CAGGTTCGAT AATCAGTTTT 
ATGGATAACT TTCTACGCCC ATTCTTCTTA AAAGACAGAA TAAAGATACA TCCTCTTTTA 
ATCTTTTTTT CAATGCTGGG CGGAGTCAGT ATGTTTTCAT TTGACGGCAT TATTTTGGGG 
CCGATGATTG TAATCTTGTT CTTTACCATT TTAGATATGG CCTTGGATAT AGAAGAAAAA 
AAAGAAAATG ATGAAGACAA TTTTGAGCAT TTAATATAA
 
Protein sequence
MYQENKHRLQ TISFFVLLAG MLILVGKLFL PYASVLLWSA VIYVLVRPLY NKILSRMNKE 
KKTFPIKKRL LAGSFAIITV LVVAGVLFFV VIKIFGQGKI LVQNIQSFLE NINNSESGFS 
KTDIAAIVNR LSMGTVDISN LDLQKEFLNL LSSSSDKILR YATSLVKNAG SFFLSLVFFA 
FALYFFYVDG AYLFSLLKHA IPIDNETSDK LFSKIGEITT NLFKGLFLVS FYQCLASFIV 
YLIFGVQSAL LLAILTFFST FLPIVGCGLI WFPVGVGLCF TDGLVKGLIF LVVAGSIISF 
MDNFLRPFFL KDRIKIHPLL IFFSMLGGVS MFSFDGIILG PMIVILFFTI LDMALDIEEK 
KENDEDNFEH LI