Gene TDE0326 details

Gene Information

• Locus tag: TDE0326
• Symbol: recQ
• ID: 2739333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 358838
• End bp: 360718
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637159198
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: NP_970940
• Protein GI: 42525842
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.149933
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGCG GATCAAAAGG TTCTGACAGT AAAAAAAAGC TCGCCTCCCC TGAAGACATT 
TTAAAACAGG TCTTCGGATA TGACGAATTT AGACCCTTCC AAAAAGAAAT TATAGACAGC 
CTTCTCCAAA AAAAAGATGT CCTTGCGGTA ATGCCCACAG GAGGCGGAAA ATCTTTATGC 
TATCAGGTTC CGGCCCTCAT TTTTGAAGGG GTAACTATAG TAGTTTCTCC CCTTATCTCT 
CTTATGCATG ACCAAATTTG CGGTTTGGAA ACTATCGGTG TTGAAGCTGT TGCCTTAAAC 
AGCTCCTTGG ATTGGGAAAA ATATGCCGAT AATATACGCC GTATTAAAAA CGGAGAAGTA 
AAAATTCTCT ATGTTGCTCC TGAAACGCTG GCCAGTGACC GATGTAAAGA GCTGCTATCT 
TCAATAAAAG TGGATTGTCT TACAATAGAT GAAGCTCACT GCATTTCGGA ATGGGGTCAT 
GATTTTAGGC CGGAGTACAG GCAGTTGGCT GAAATACGCA AGCTCTTAAA AGAATCGGCC 
TGTCTTGCCA TAACGGCAAC AGCAACCGAA AAGGTGCGCT CAGATATAAA GAAAATACTA 
AAGCTCAAGA CGCCAAAGGA GTTTGTTGCC GGTTTTAACC GCAAAAACAT TTTTTTGGAA 
GTGAAAGAAA AGCAAAAGCC TTTTGAACAG GCTTCGGACT TTCTAAAAGA ACATAAGGGC 
GAAAGCGGAA TTATTTACTG TTTTTCCCGC AAACAGGCAG ATACCTTGGC CGTTCAATTA 
TCGGTTTTAG GCTATAATGC AAAACCCTAC CATGCGGGAC TATCCGACGA GCTTAGGCAA 
AAAACTCAAA ACGATTTTAT CAATGACGAT ATAGAAATAA TTGTAGCAAC CGTGGCCTTC 
GGGATGGGAA TAAATAAGCC CAACGTAAGA TTCGTTATTC ATTTTGATTT ACCCAAGAGT 
ATTGAACAAT ACTATCAGGA AATAGGCAGA GCAGGCCGAG ATGGAAATCC GGCTCATGCT 
CTTTTGCTTT TTTCGGCTGC CGACATTTTT AAGCTCAAAT TCTTGATGCA GGATAAATCT 
CCCGATGAGG TAAAAAAAGC CGAATCAATG CTTTCAGCTA TAAGTAATTA TGCTCAAGCC 
AATAGCTGCC GCCGACGGGC AATTTTAAAA TATTTCGGAG AAAATATTTC CGAAGAAAAA 
CTAAAGGAAA TACAGGGCGA TGCTCCGTGC TGCGATTTTT GTTCCAGAGA AAAAATAGAA 
AAAACCGATT TAACGGTTCC TGTGCAGAAA TTTTTATCCT GCGTTGTCAG AACCGGATGC 
CGATTTGGAG CAAGCTATAT AATCGATGTT CTTTTAGGCT CAAAGCAAAA ACGAATACTT 
GAAAACAAGC ATAATGATCT TTCCGTCTGG GGTATAGGTA CGGAATTCAA TAGGGAAGGA 
TGGTTTAATC TTGTCCGTAT TCTATTAGCG GAAGACTATC TTGTAAAAGA TGAGGATTAC 
TCGGTATTAT CGCTTACCCA AAAAGCAAAA GAAGAGCTCC AAGCCCGAAC AAGTATCATG 
CTTCCTTTTA ATTATGAAAA AGACAATTCG GTTAAAAAAG AAGTAAAAGA AAAATCAAAA 
CCTCAAACAT CTGAAAATAC TTTAGATGCT TGCAGTAAGG CAATAGTGGA TGCACTAAAA 
CAAAAGCGCA GGGAGCTTGC CGATGAGGCA AGGGTTCCGG CCTATATTAT TTTTTCGGAT 
AAGACCATCT TTGATTTGGG CTTAAAAAAA CCTACAACGA CTACCGATTT GGATAATATC 
TTTGGAATAG GAAAAGCAAA GAAAGACAAA TACGGGGATA TTATTTTAAA GACAATCTCA 
TCTGCCCGTA AAAATAAATA A 

 

Protein sequence

MTRGSKGSDS KKKLASPEDI LKQVFGYDEF RPFQKEIIDS LLQKKDVLAV MPTGGGKSLC 
YQVPALIFEG VTIVVSPLIS LMHDQICGLE TIGVEAVALN SSLDWEKYAD NIRRIKNGEV 
KILYVAPETL ASDRCKELLS SIKVDCLTID EAHCISEWGH DFRPEYRQLA EIRKLLKESA 
CLAITATATE KVRSDIKKIL KLKTPKEFVA GFNRKNIFLE VKEKQKPFEQ ASDFLKEHKG 
ESGIIYCFSR KQADTLAVQL SVLGYNAKPY HAGLSDELRQ KTQNDFINDD IEIIVATVAF 
GMGINKPNVR FVIHFDLPKS IEQYYQEIGR AGRDGNPAHA LLLFSAADIF KLKFLMQDKS 
PDEVKKAESM LSAISNYAQA NSCRRRAILK YFGENISEEK LKEIQGDAPC CDFCSREKIE 
KTDLTVPVQK FLSCVVRTGC RFGASYIIDV LLGSKQKRIL ENKHNDLSVW GIGTEFNREG 
WFNLVRILLA EDYLVKDEDY SVLSLTQKAK EELQARTSIM LPFNYEKDNS VKKEVKEKSK 
PQTSENTLDA CSKAIVDALK QKRRELADEA RVPAYIIFSD KTIFDLGLKK PTTTTDLDNI 
FGIGKAKKDK YGDIILKTIS SARKNK