Gene TDE0313 details

Gene Information

• Locus tag: TDE0313
• ID: 2740512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 345514
• End bp: 346206
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637159185
• Product: TrkA domain-containing protein
• Protein accession: NP_970927
• Protein GI: 42525829
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000239618
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACAA ATAAAAACTT TGCAGTCATA GGTTTGGGAG AATTCGGTTC AAGGATTTGT 
GAAGTTCTTG TAGACGGAGG TGCTTCAGTG GTTGCCTTCG ATCATGATAT TCAAGCCGTC 
GAAAGAATAA AAAAAATCGT TCCGGCAGCA ATGCTTGTAG AAACTACAAA TGAAGAAGCT 
CTTTTAAAAG CCCCTTTGGA TGATGTAGAA GTCGCCATAG TCGCCATCGG CAATAATATA 
GAAGCAAGCG TTTTAACAAC TACTCTTTTA AAGCAAAGAG ATATTCCCTA TGTTTTAGCG 
CGTGCCGTTT CACCTCTCCA CGCAACAGTT CTACGAAGGG TAGGAGCAAA CGAAGTTTTA 
AATATTGAAA TATCAGCAGC AACAAGAATT GCGAGGCGGC TTATTTCTCC CGATGTAATG 
GACTCAATTG CAGTTACAAA AGATTTTTCG ATAAGAGAAA TCATTGTGCC GAAATTTTTT 
ATAGGAAAAA CAGTCGGTTC CGTTGCTCTA AAAGAAAAAT TCAATATTAC TTTGATTGCT 
CTTGTTAGAA TGGCTTTGGA TATAGATTCT GTCGGTAATC CTGTCAAACA GGAGGTTATG 
CACTATCCGG AAGATGATTT TGAGTTGAGA GAGGGCGATA AACTTTTTTT GATAGGCTCA 
AATATAAAAC TTGAAGAATT TAGAAATATG TAA 

 

Protein sequence

METNKNFAVI GLGEFGSRIC EVLVDGGASV VAFDHDIQAV ERIKKIVPAA MLVETTNEEA 
LLKAPLDDVE VAIVAIGNNI EASVLTTTLL KQRDIPYVLA RAVSPLHATV LRRVGANEVL 
NIEISAATRI ARRLISPDVM DSIAVTKDFS IREIIVPKFF IGKTVGSVAL KEKFNITLIA 
LVRMALDIDS VGNPVKQEVM HYPEDDFELR EGDKLFLIGS NIKLEEFRNM