| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0307 |
|---|
| Symbol | |
|---|
| ID | 2741028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 338795 |
|---|
| End bp | 339700 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637159179 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_970921 |
|---|
| Protein GI | 42525823 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000281686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA ATATGATAAC GGCACTTCCC TTTTTATTAA AAAAAATATA CTCTATAAAA
ATGGAAAAAT ATTCTTTTCA AAATAGAACG CATAAGTTAA TAGCGGGGAT TTTTCTTTTT
ATCGGTTTTT CGTTTTTTTG TTATGCCCAA GAAATTCCTG CAAGCCCGTC GGATTCAGAT
AAGATAAAAA TCTTTAGCTT GGAGGAATGT AATTCTCTTT TCGCAGAATA TTATAGAGCC
GGTTCTATCG GTGATGAAGA TTTGAAAATC TTAACAGACG GAAAAAATAT TCTTACAGAT
TCTCTGGAAA AAATTCTTTT AGAGAATAAA AAAAACAGGG ATATAAAAAA ACAAAACGAG
CTCTTAATTT TATATCTTAA ACATGCCGAG ATTATTTCTA CCATTTATAA TTACGGCAGT
ATGAATCATC AAGGTGAGGA AATAAAAAAG ATAGATAAGG ATTTAAAAAG ATTTTTAAAG
CTATCCGATT TGGAAGGTGA GGTGTATTTA AAATATGCAG ACTACTTATA TACAAAACTC
AAGCTACCTG AAACAAACCG TTTTAGCACA AAATTAGCTC TTCCGGTTTT ATACAGGATG
GCCCTTTTAA AAGATAAAAC CAATAAGGCT GCTTTTGTAA AGCTGTCATG CTGGCAGATT
TCTTCAGCCG ATGAAACCAC CTCTAATTTT AATTCTCAAA TTAAAGCAAC GGAAAAATAT
ATTGAAGAAT TAAATGAGAT TGATAGATTC AATGCATTTA TTTGGTATTC CATATTTTAT
ATGAAAATAT ATGATACAAA AAAAGGGTGG AAATATTTTT ACAAAGCAAA AAATCTTTTC
CCCAATCATC AGATTGTTTT GTTGCTTTAT GAAAATTATA AAAAAGGAAT CTTAGGCGGA
TTATGA
|
|---|
| Protein sequence | MAKNMITALP FLLKKIYSIK MEKYSFQNRT HKLIAGIFLF IGFSFFCYAQ EIPASPSDSD
KIKIFSLEEC NSLFAEYYRA GSIGDEDLKI LTDGKNILTD SLEKILLENK KNRDIKKQNE
LLILYLKHAE IISTIYNYGS MNHQGEEIKK IDKDLKRFLK LSDLEGEVYL KYADYLYTKL
KLPETNRFST KLALPVLYRM ALLKDKTNKA AFVKLSCWQI SSADETTSNF NSQIKATEKY
IEELNEIDRF NAFIWYSIFY MKIYDTKKGW KYFYKAKNLF PNHQIVLLLY ENYKKGILGG
L
|
|---|
| |