Gene TDE0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0296 
Symbol 
ID2740283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp326932 
End bp327831 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content43% 
IMG OID637159168 
Productformiminotransferase, putative 
Protein accessionNP_970910 
Protein GI42525812 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3643] Glutamate formiminotransferase 
TIGRFAM ID[TIGR02024] glutamate formiminotransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0468401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACA AAATAATTGA ATGTGTTCCC AACTTTAGTA ACGGCCGCGA TCCTGAAGTT 
TTGGAAAAGA TTATAGCCCC CTTCCGCGGA AAAGAAAATG TAAAACTGCT TGATTACGAA
TCCGACAAGG ATCATAACCG CTCTGTTGTA ACCGTAATCG GTGAACCCGA AGAACTTAAA
AAAACCGTAG TAGAAGCTAT CGGAATAGCC GCTAGTCTCA TTGACTTACG CAAGCATGAG
GGAGCCCACC CCAGAATGGG AGCTACCGAT GTTGTCCCCT TTATTCCGAT TAAAAATTCC
ACAATGGAAG AATGTATCGA ATTATCCAAA GAGGTTGGAA AGCTCATCTG GGAGCAGCAC
AAGATACCCG TATTTTTATA CGAAAAATCG GCATCTTCCC CTGCACGTGA AAATCTTTCC
AATATCCGAA AAGGACAATT TGAAGGCATG GCTGAAAAGG TAAAGCAGCC CGAATGGAAA
CCCGACTTCG GCGGAACGGA AATTCATCCT TCTGCAGGTG TTACGGCTGT GGGCTGCCGA
ATGCCCCTCG TTGCCTTTAA CGTGAACTTG GCCACAAACG ATCTTTCAAT CGCAGACAAG
ATTGCAAAAA AAGTTAGGTT CATAGGCGGA GGCTTGCGCT TTGTAAAAGC AATGGGTGTA
GACCTTACGG AGCGCGGAAT TGTTCAAGTT TCAATGAACA TGACGGACTA CACAAAAACT
TCTCTTTATC AATCTTATGA AATGGTAAAA ATGGAAGCAA AACGCTACGG CGTAAATGTC
GTCGGTACCG AAATTGTCGG CCTTACCCCG ATGGCAGCCT TAATGGATGT TGCTTCTTAT
TATCTCCAAA TCGAAAACTT TGAATTCAGC CAAATAATTG AAGCAAGATT ACTCGAATAG
 
Protein sequence
MMNKIIECVP NFSNGRDPEV LEKIIAPFRG KENVKLLDYE SDKDHNRSVV TVIGEPEELK 
KTVVEAIGIA ASLIDLRKHE GAHPRMGATD VVPFIPIKNS TMEECIELSK EVGKLIWEQH
KIPVFLYEKS ASSPARENLS NIRKGQFEGM AEKVKQPEWK PDFGGTEIHP SAGVTAVGCR
MPLVAFNVNL ATNDLSIADK IAKKVRFIGG GLRFVKAMGV DLTERGIVQV SMNMTDYTKT
SLYQSYEMVK MEAKRYGVNV VGTEIVGLTP MAALMDVASY YLQIENFEFS QIIEARLLE