| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0295 |
|---|
| Symbol | gyrA |
|---|
| ID | 2740282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 324310 |
|---|
| End bp | 326757 |
|---|
| Gene Length | 2448 bp |
|---|
| Protein Length | 815 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637159167 |
|---|
| Product | DNA gyrase, A subunit |
|---|
| Protein accession | NP_970909 |
|---|
| Protein GI | 42525811 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000104169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGAGA TACAAACTAA GGAAGGCGGA GCCGTAATTC CGATTCCTAT CGAAAATGAA
GTAAAAAGAG CCTACATAGA TTATTCAATG TCAGTTATCG TAAGCCGAGC CCTGCCCGAT
GTAAGGGACG GTCTAAAGCC CGTTCACAGA CGTATCCTTT ATTCAATGGA AGAAAAGGGC
TTACGCAGTT CAGGCCCCAC CCGAAAATGT GCTAAGATCG TAGGTGATGT ATTAGGAAGT
TACCACCCTC ACGGCGACGC TTCGGTCTAT GATGCCCTCG TCCGCCTTGG ACAGGACTTC
TCTCTCCGCT ATCCGGTTAT TTATCCCCAA GGAAACTTCG GAACCATAGG AGGCGACCCG
CCCGCAGCTT ACCGATACAC GGAAGCTAAG ATGGCCAAAA TAGCCGAAAC CATGGTCGAG
GATATAAAAA AAGAAACAGT CGATTTTATT CCGAACTTTG ACGATTCTAC AAAAGAACCG
ACCGTTCTTC CGGCTAAATT TCCCTTCTTG CTTGCAAACG GTTCAAGCGG AATTGCCGTC
GGTATGGCAA CCAATATGCC GCCCCACAAC TTACGCGAAA TAGCCGATGC GGTTTCAGCC
TACATAGACA ATCCCGAAAT CGAAATAGAC GAGCTTTGTA AATATATGAA GGGTCCCGAC
TTCCCGACAG GCGGAGTTAT CTACGGACGA AAGGGAATAA AACAAGCCTT TAAAACAGGC
CGCGGAAAAA TATTGGTACG CGGTAAATTT ACAATCGAGG TCGATAAAAA AGGAAAAGAA
ACAATAGTCT TTACCGAAGT ACCCTATCAG GTAAACACGA CCACCCTTGT ATCCCGTATC
GGGGAACTGG CCCGCGAAAA AATTATAGAC GGAATCGCAA ACGTAAACGA TGAAACTTCG
GATAGAACAG GCTTGCGAGT TGTTATAGAG CTAAAGAGGG GGGCTATTAC AAAGGTTGTT
TTAAACCAGC TTTTTGCAAA GACTGCCCTT CAATCTTCTT TCGGAGTTAT AAACCTCGCT
CTTGTAAACG GAAGGCCTGA AACCCTTAAC TTAAAACTTC TTGTAAAATA CTTTGTCGAG
CACAGGGTCG ATGTAGTTAC CCGCAGAACA AAATTCGATT TGCGTAAGGC GGAAGAAAGA
GCTCATATCT TGGAAGCCCT CATCGTCGCC ATCGACAATA TAGATGAAGT TATCAAAATA
ATAAGGTCAT CCCGAGATCC GCAAACGGCA AAAAACAACT TGATGGAAAG GTTCGGCTTT
GATGATGTTC AAGCTCAGGC CATAGTCGAT ATGCAGCTAA AGCGTTTAAC CAGCTTGGAA
ATTGAAGACC TCCGAAAAGA GTTACAGGAA TTACAGGTTC TAATCGCTCA CTTAAAGGAC
CTCCTTGCCC ACCCCGAAAA GATTTTAGCT CTAATAAAGG AAGAAACTAA CGAGATAGCC
GAAAAATTCG GAGATGAGCG CAAGACCGAT ATAGTAGCCG ATGAGGTTGA AGAACTCAAT
ATCGAAGACC TTATTAAAAA AGAAGAGATG GTTATTTTAA TTTCCCACCT CGGATATATT
AAGCGTATTC CTGCCACAGC CTATAAGAGC CAAAATAGAG GCGGCAAGGG TTCCAATTCC
GTAAACCTTG CCGAAGATGA CTTTTTGGAT CAGATTTTTA CGGCCTCAAC CCATGACTAT
ATTATGTTTA TCACAAATGC GGGAAAGGCT TACTGGTTAA AGGTGCATGA AATACAGGAA
GCCAGCAGAA CAAGCCGCGG CTCTCACATA AAATCCCTTC TTTCCGTTTC TTCCGATGAA
GAAATTACGG CTGTTGTTTC CTTAAAAGAA TTCGACGATA AGACCTATCT TTTGATGGCA
ACAGCAGGCG GTGTTGTAAA AAAAGTAACA ACCGATAATT TTGCAAATGC AAAAACCCGC
GGAATCATAG CGATAAAACT CGATGAGGGC GATAAACTTG TAAGTGCAAT TCTTACAGGC
GGCAAGGACG AAATCATGCT GATTACCCGC CGAGGTCAAG CCCTCCGCAC AAGCGAGGAA
GACATCCGCT CTCAAGGGCG TTCTTCCCGC GGTGTTACCG GAATAAAGCT TTCTTCTGAG
GACGAACTTA CGGGCGCACT CCGAGTGACG GAAAATCAAA AGATGCTTGT TATGACCGAA
AACGGCTACG GTAAGCGCGT GGAGTTTTCC GAATTTTCAG CTCATGGAAG GGGAACCGGA
GGACAGCGTA TCTATACCCT CTCTGAAAAA ACGGGAGAGG TTGTAGGGCT TCTTACCGTC
TTTGATGACG ATGAAGTTGT CTGCATAACG GGCCAAGGAA AAACAATCCG CATAAGCGTA
GACTCTGTCG GCACTATGGG AAGGTCTGCA CAGGGTGTAA GAATATTAGA TATTGAAAGC
CCCGATATGC TTATAGGGCT TGATGTTGTT GCCCGCGATG AAGAATAG
|
|---|
| Protein sequence | MEEIQTKEGG AVIPIPIENE VKRAYIDYSM SVIVSRALPD VRDGLKPVHR RILYSMEEKG
LRSSGPTRKC AKIVGDVLGS YHPHGDASVY DALVRLGQDF SLRYPVIYPQ GNFGTIGGDP
PAAYRYTEAK MAKIAETMVE DIKKETVDFI PNFDDSTKEP TVLPAKFPFL LANGSSGIAV
GMATNMPPHN LREIADAVSA YIDNPEIEID ELCKYMKGPD FPTGGVIYGR KGIKQAFKTG
RGKILVRGKF TIEVDKKGKE TIVFTEVPYQ VNTTTLVSRI GELAREKIID GIANVNDETS
DRTGLRVVIE LKRGAITKVV LNQLFAKTAL QSSFGVINLA LVNGRPETLN LKLLVKYFVE
HRVDVVTRRT KFDLRKAEER AHILEALIVA IDNIDEVIKI IRSSRDPQTA KNNLMERFGF
DDVQAQAIVD MQLKRLTSLE IEDLRKELQE LQVLIAHLKD LLAHPEKILA LIKEETNEIA
EKFGDERKTD IVADEVEELN IEDLIKKEEM VILISHLGYI KRIPATAYKS QNRGGKGSNS
VNLAEDDFLD QIFTASTHDY IMFITNAGKA YWLKVHEIQE ASRTSRGSHI KSLLSVSSDE
EITAVVSLKE FDDKTYLLMA TAGGVVKKVT TDNFANAKTR GIIAIKLDEG DKLVSAILTG
GKDEIMLITR RGQALRTSEE DIRSQGRSSR GVTGIKLSSE DELTGALRVT ENQKMLVMTE
NGYGKRVEFS EFSAHGRGTG GQRIYTLSEK TGEVVGLLTV FDDDEVVCIT GQGKTIRISV
DSVGTMGRSA QGVRILDIES PDMLIGLDVV ARDEE
|
|---|
| |