Gene TDE0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0285 
SymbolfusA-1 
ID2741602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp313762 
End bp315813 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content46% 
IMG OID637159157 
Productelongation factor G 
Protein accessionNP_970899 
Protein GI42525801 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATA AGATGCGTAA CATAGGAATA ATGGCTCACA TAGACGCTGG AAAAACCACC 
ACAACCGAGC GTATTTTGTT TTATACGGGA AAAATTCATA AGATAGGCGA AATAGATGAC
GGTCAAGCAA CCATGGACTG GATGGCACAA GAACAGGACA GGGGAATCAC TATCCAAAGT
GCAGCCACTA CCACTTATTG GAAAAACTTT CAGATAAATA TAATCGACAC TCCCGGGCAC
GTAGACTTTA CGGCCGAGGT AGAACGTTCC TTGCGTGTCT TGGACGGAGC CGTTGCAGTC
CTCTGTGCAG TCGGAGGAGT TCAGCCCCAG ACCGAAACTG TTTGGCATCA GGCAGACCGG
TACAAGGTTC CCCGCATTTG CTTTGTAAAC AAGATGGACA GAATCGGAGC CGACTTTTTT
GCAGTTTTAA AAGATGTGCA CGAAAAATTC GGCGTTGAAG TCATGCCCGT TCAAATTCCT
ATTGGAGCAA GCGACAGCTT TGAAGGAGTT ATCGATCTTA TTGCAATGAA AGAAATTCAC
TGGGATGCTG CAACCGAAGG CGAAAAATAC GAATATACCG CAATAGCCCA AGAGCGCCTC
GCCTTGGCGG AAGAATGGCG CGAAAAAATG CTCGATACTA TTTCTTCAGC TTCGGACGAA
ATCACCGAGC TCATCCTTGA AGGAAAAGAT GTCCCCGAAG AGCTTATCAA AAAAGAAATA
AGAAAGGCGG TTTTAAATCA AAGCTATATT CCGTTTTTAT GCGGGTCTGC ACGAAAGAAT
ATCGGAGTTC AACCCTTAAT CGATGCAGTC GTCGACTTTT TGCCCGCCCC CAATGAGGTT
CTTCCGGCAG AGGCCTTTAA TCCCAAAAAG GAAGAAAAGC TTTCTGTCCC CTGCAAGGCA
GAAGGAGCAC CCTTAGGCCT TGTATTTAAA ATTCAATACG ATAAGGATGC AGGAAGCCTT
TGCTATGTCC GAATGTACTC GGGTAAAATC AAATCGGGCG ATCAAGTTTT TAATACGGGA
AAAAAGAAAA GAGAACGCGT AAACAGAATC TTGCGTATGC ATTCAAATAA GTCGGAACAA
ATGGATTCCG TTCAAGCCGG AGATATTGCC GTTTTTATCG GTTTAAAAAT CTCTCAGACA
GGAGATACTC TGGGCTCCGA GGGACAGCCT CTCTTGCTTG AATCCATGCA ATTCCCCGAA
CCTGTTATTT CCGTTTCGGT AGAACCTAAA AGCTTATCGG AAAGCGACCG CTTAAAAGAG
GTCTTGGAAA TTCTTTCAAA GGAGGATCCG ACCTTTACAA GCCGCGAAGA CAGTGAAACG
GGGCAGCTTA TAATTTCCGG CATGGGAGAA CTTCATATAG ATGTTTTAAC CCGCCGAATG
TTGGATGATT TTAAGGTAGA AGCCAGAGTC GGAAACCCGC AGGTTACTTA CAGGGAATCC
ATCACTACCG AAAAAACTCA AACCGAAAAA TACAGCAAGC AGCTGGGCGG GAAAGACAAT
GAAGCTGAAC TTACCCTTAC TGTCCGCCCC CTTGAAAGAG GAAGCGGAAA CCGCTTTGTT
TCAAAAGTTA AGACCTTCCA AAAGTCCGGT TCGGGCGGCA CCAATGCTCT CCCCGAAGAT
CTTTTAGAAG CCGTTAAGCG TTCTATTGAA GGCTGCTTTA GTTCTGGCAT CAAGGTCGGT
TATCCTTGCA CCGACATCGA GGTAGAACTT GTTTCGGTAA AATACAATGA ACTTACGGCA
ACCCCCTTCG CCTACGAAGC TGCCGCCGCA AAATGTTTTG ATGATGCTTG CAGTGCAGCA
GCCCCCGTGC TCTTGGAGCC GGTAATGGCT GTGGACATTA TGAGTCCCAA AGAATTCGTC
GGAGATGCCA TGAGCCAAAT CACTCAGAGG GGAGGCTTAA TCTCAAGCAT GGATTCAAAG
GCAAGTACCG ACATTGTACA CGCTCAAGCC CCCATGGCAA AGATGTTCGG CTTTTCCACC
GACCTCCGTT CAGCCACTCA GGGAAGAGCA TCCTTTACCA TGAGCTTCAG CCATTTTGAA
ATTAAACGGT AG
 
Protein sequence
MLDKMRNIGI MAHIDAGKTT TTERILFYTG KIHKIGEIDD GQATMDWMAQ EQDRGITIQS 
AATTTYWKNF QINIIDTPGH VDFTAEVERS LRVLDGAVAV LCAVGGVQPQ TETVWHQADR
YKVPRICFVN KMDRIGADFF AVLKDVHEKF GVEVMPVQIP IGASDSFEGV IDLIAMKEIH
WDAATEGEKY EYTAIAQERL ALAEEWREKM LDTISSASDE ITELILEGKD VPEELIKKEI
RKAVLNQSYI PFLCGSARKN IGVQPLIDAV VDFLPAPNEV LPAEAFNPKK EEKLSVPCKA
EGAPLGLVFK IQYDKDAGSL CYVRMYSGKI KSGDQVFNTG KKKRERVNRI LRMHSNKSEQ
MDSVQAGDIA VFIGLKISQT GDTLGSEGQP LLLESMQFPE PVISVSVEPK SLSESDRLKE
VLEILSKEDP TFTSREDSET GQLIISGMGE LHIDVLTRRM LDDFKVEARV GNPQVTYRES
ITTEKTQTEK YSKQLGGKDN EAELTLTVRP LERGSGNRFV SKVKTFQKSG SGGTNALPED
LLEAVKRSIE GCFSSGIKVG YPCTDIEVEL VSVKYNELTA TPFAYEAAAA KCFDDACSAA
APVLLEPVMA VDIMSPKEFV GDAMSQITQR GGLISSMDSK ASTDIVHAQA PMAKMFGFST
DLRSATQGRA SFTMSFSHFE IKR