Gene TDE0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0276 
Symbol 
ID2741569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp307493 
End bp308119 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content27% 
IMG OID637159148 
ProductHD domain-containing protein 
Protein accessionNP_970890 
Protein GI42525792 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000537325 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCGA AAAGAATAGG AACATTTTTA ATTGATTTTA ATCAAAATGA TAAACTAGTT 
AATCAACTCA ATTTTATTAT AGAAATAGAT AAAGTTAAAC ATATTTTCCG GCAATCAAAA 
TTATTTAATT CCGAAAGATT GGAAAATGAT GCCGAACACT CTTGGACAAT TTCAATCATG 
TGTATTTTGT TAAAAGAATA TGCCGATTTT GAAGTTAATA TTGAAAAAGT TATTTCAATG 
CTATTAATCC ATGATATCGT TGAAATAGAT GCAGGAGATA CCTTTTTATA TTCTTCACAA 
AGAGATGAAT CTTATAATAA TGAAAAAAAA GCGGCAGATA GAATCTTCGG TTTATTGGAA 
CCGGATCAAA AAAAATATTT TTTAAGCTTA TGGGAAGAAT TTGAAGAAAG AAAAACGAAT 
GAAGCAAAAT TTGCTTCCGT ATTTGATAGA TTGGAACCTA TAATTCAAAA TTATATGTCT 
GAAGGTTATT CTTGGAAGAA AAATAACATA ACATATGATA TGGTAATAAA TAAGAATATG 
CATATTAAAG ACGGCTCGGA AAAAATATGG AATTTTGTCC TGCAATTATT GGAAAAAGCC 
GTTGAAAAAG GATATTTAAT TAAATAA
 
Protein sequence
MESKRIGTFL IDFNQNDKLV NQLNFIIEID KVKHIFRQSK LFNSERLEND AEHSWTISIM 
CILLKEYADF EVNIEKVISM LLIHDIVEID AGDTFLYSSQ RDESYNNEKK AADRIFGLLE 
PDQKKYFLSL WEEFEERKTN EAKFASVFDR LEPIIQNYMS EGYSWKKNNI TYDMVINKNM 
HIKDGSEKIW NFVLQLLEKA VEKGYLIK