Gene TDE0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0246 
Symbol 
ID2741445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp281186 
End bp281755 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content36% 
IMG OID637159120 
ProductTetR family transcriptional regulator 
Protein accessionNP_970862 
Protein GI42525764 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.330264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTAT TAAAAGAAGA AGTCAAGGAT AGAATTCTGA CGGCTGCGGA AAAAGTATTT 
TATGAACAAG ATTACAGAAG TGCAAAGCTG ACGGATATTG CAGAACAGGC TGATATTCCC 
GTTGCGCTTA TTTATACCTA CTTCAAAAAC AAAGAAGGAT TATTTGATGA AGTAGTCGCA 
GGCGTATTGG ATAAAATCAT TAAGATGATG GAAGATGAGG AAAAGATGGA AGCCGGAAGC 
CCCTATGAAA GATTTAATCG GGGCGGAGCA TCTCAACTTC CCAAACTGTT AAAAAACAGA 
ATTAAACTCA TCATTTTAAT AGACAAGAGC TCGGGAACGA AACATGAGAA TGCAAAAGAT 
ATGTGGGTTA AACGATTGGA ACAGCATATA AAAGACGGTT TAAAAAGATA TTCAAAAACC 
AAGCACGATC CCATGCTTGC TCATATTTTG GCAAATAATT ATGTTGAGGG ACTTATGGAA 
ATTGCACGGC ACTATAAAAA TGAAAAATGG GCAGAAGATA TGCTCTTTGT TCTTAACAAG 
TGCTATTTTA ATGGAGTTGA ATCATTGTAA
 
Protein sequence
MQVLKEEVKD RILTAAEKVF YEQDYRSAKL TDIAEQADIP VALIYTYFKN KEGLFDEVVA 
GVLDKIIKMM EDEEKMEAGS PYERFNRGGA SQLPKLLKNR IKLIILIDKS SGTKHENAKD 
MWVKRLEQHI KDGLKRYSKT KHDPMLAHIL ANNYVEGLME IARHYKNEKW AEDMLFVLNK 
CYFNGVESL