| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0228 |
|---|
| Symbol | |
|---|
| ID | 2739080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 259701 |
|---|
| End bp | 260693 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637159102 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_970844 |
|---|
| Protein GI | 42525746 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000838825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGGC GTGAAGTAAA AAATCAAACA AATATTTCTA GAATTGAAGG AATTAAACCA
AATGATGCTT ATGTTGCTTA TGTATGTGTA CAATGTAACA ATTTGAATAT GATAAATATT
GGACAAAAAT TATTAGATCC AAGAGAGGCT TATGAAACAC AAGAATGGAA ATGTGAAAGA
TGTGGATTTT TACATAGTAA AAATAATTCA TTGTCTTATT CAAACTGGCC AGAAGAAAGT
AAAAAGAAAG GTTCTATTCC TGTACAAAGA TTTTGGCAAG CTTTTTTTAG AGTATATACA
GAGAATAAAG AAGCATATTG GAAACAATGT AATTGTTGTG GAAAAATATT ACCATTTTCC
GCATTTAGCA AGCATATTGG TTTTGGCCCT CTTGAAAGAC AAATGGAATG TAGAGCTTGT
AAGGGAGTGA TAAATGCATT TTTAAATCCA GAAAGAACAG AAGATCAATT AAGAGAGTCA
AATGTTAGGA GACGTGTTGC CGATTTGTTT GTTAAAAAAG AAAATAAATC TAAAGATGAT
GGATTTATTA AAGATTTATT TAAACGTTTT GGTTCAAAGT GCTTTAAAAC AAAGAAATAT
CTAAATATTC ATGATAGAAA TTCTTGGGCT ATAGATCATA TTTTACCATC AAAATATCTT
TATCCTCTTA CAAAAGAAAA TGCTGCACTA TTATCTGTAG AAGCTAATTC CAATAAAAGA
GATCGTTGGC CTTCAGAATT TTATACAAAT AATGAATTAA TAGAACTTGC TACAATAACA
GGAGCTGATT TACAATTATT ATCAAATAAA ACACCTATTA TAAATCCAAA TCTTACTGAT
GAGGATATAA ATGCAGGTAT TGAGAATTAT TTGTCTGTTC GTGAAAATTC AAACCTTGAG
AAGCGAGTAG CTGAAATAAA AAAAATCATA ATAGACTATC AATTAACGGA TAAATTATCG
AAAAGCAACA AGAATTTACT TGGTTTATCT TAA
|
|---|
| Protein sequence | MSRREVKNQT NISRIEGIKP NDAYVAYVCV QCNNLNMINI GQKLLDPREA YETQEWKCER
CGFLHSKNNS LSYSNWPEES KKKGSIPVQR FWQAFFRVYT ENKEAYWKQC NCCGKILPFS
AFSKHIGFGP LERQMECRAC KGVINAFLNP ERTEDQLRES NVRRRVADLF VKKENKSKDD
GFIKDLFKRF GSKCFKTKKY LNIHDRNSWA IDHILPSKYL YPLTKENAAL LSVEANSNKR
DRWPSEFYTN NELIELATIT GADLQLLSNK TPIINPNLTD EDINAGIENY LSVRENSNLE
KRVAEIKKII IDYQLTDKLS KSNKNLLGLS
|
|---|
| |