Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0206 |
Symbol | |
ID | 2739812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 239761 |
End bp | 241617 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637159075 |
Product | surface antigen, putative |
Protein accession | NP_970822 |
Protein GI | 42525724 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000122541 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAACC GTCATCATAG CCTTATCATG TTTAATTATT TTAATGCGAG GTTTTGTTTT ATGGGTATAA AAAAACTAAA GAAGACTATA ATTTTTATGA GTTTTATTTT TCTTGTTGCG GCTTGTTCGG ATAATAAGCC GGAGAAAGAA CAAGATATAA AAACTGTTGA CGGCAAAAAC GATGTTAAAG AAGAAGAACC CATAAATTTG CCTAATACGG AATCTATAAG CTTGATCACG GCAAAGTCAA AGGGTGAAAA AATAAAGCTT AGGGTTGAAA GATTTGTTTC CAATCGTGAG CCTATATGGA TCGATTTAAA TTCAAATAAA AAAATGGATG AAAATGAAGA TATAACGCCT TTTGTTGTAC CGGGTATGTC CGCTTATCGT GATTATACTA TTGATAGTGA GGTTATAACT ATATATGGTA AAATAAATAG GTTTTTTTGT GAGGGAAACC GTATAACAAG TATTGATTTA GCTAATAATC CTTCATTAAC ACATCTTTCT TGTTCCGATA ATAACCTTCA AGACTTATCT CTTATAAATA ACAGGAATCT GGTATATTTA TCTTGCGGTA AAAATAATTT GACTTCTATA GATTTTAGCC AAAATTTCGA TTTAAAAGAA ATTTTTTGTG ATGAAAATCT AATCAGAGAA CTCGATGTTT CTCATATTAA GGTGTTAACA ACTTTAGAAG CTCAAAAAAA CAAATTGAAA TTTCTCGATA TGTCGAAAAA TACATCTCTT ATAACTTTAT ATTGCCATGA AAATGAGCTG ACATATTTAA ATACGGATAA TTGTAAAAAC TTAAAATTTC TTTCTTGTTC CGAAAATGCT CTTACATCCA TAGATATAAG TTCAAATCCT ATTTTGCGTA AATTATGGTG TGCAAATAAT AAACTTAAAA ATATCGATTT ATCGAAAAAT GTGAACCTTA CATTTCTTGT GCTGAATAAT AACTTATTAT CGGAATTGGA TATAAGCAAT AATCCCAGCT TAAAAGAGTT TTGGTGCTAT AAAAATAATC TATCCAATTT ATCTTTAGAT GGTCATGAGA ATCTTGAAAT ATTATCTTGT TATGATAATC AACTGAATTC GCTTGATATT TCTCATCTTC CGGAATTACA AGAATGCTAT TGCTACAATA CAAATATAAG CGAGCTGGAT GTATCTAAAA ATAATAAGTT GATAAGATTG TCTTGCGGCA AAAATAATCT TTCTCAAATA AACTGTTCTA ATCTTAAAGA TCTTGAGTTT CTTTATGTAT CTGAAAACAG CCTTTCAGCT TTGGATATAA CGCAGAATTT AAATCTTACG GAGCTTGATT GTGGAGGAAA TATGTTGACA GAATTGAATA TAAACAGTAA TAGAAAACTA AAAGAATTAT ATTGCAGAAA TAATAAACTA AAGGCTCTTA ATACATCTAA TAATGTAAAA TTAATTTATC TATACTGTAA ACAAAATGAA ATTACAGATA TCGATCTTAC AAAAAATACG GAATTGCAGT TTTTGTCTGT AAGCGAAAAC CGTTTGAAAT TTTTGAATTT ACGAAATAAT GTAAAATTGG AAAAGCTATG GTGTTACGAT AACTTACTCA TGGGGCTTAG TGTTTTAAAT AATAAGAATA TAAAACTTAT ATCTTGTTAT AATAACCAAA TAAAAGAAAA AGAGATGGAT AGGCTCATAA AATCTTTACC GACCCGTTCA AGCGAAGAAA ATGGAAGATT CTACGTAGTC GATAGACGGG AAAATAGTAC AGATAATAAT ATCTGTACTA TTCAGCAGGT TAATGATGCA AAGAAAAAAC ATTGGAATGT TCTAAAATCC GATAGCGGCG AATTTACGGG CCATTAA
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Protein sequence | MKNRHHSLIM FNYFNARFCF MGIKKLKKTI IFMSFIFLVA ACSDNKPEKE QDIKTVDGKN DVKEEEPINL PNTESISLIT AKSKGEKIKL RVERFVSNRE PIWIDLNSNK KMDENEDITP FVVPGMSAYR DYTIDSEVIT IYGKINRFFC EGNRITSIDL ANNPSLTHLS CSDNNLQDLS LINNRNLVYL SCGKNNLTSI DFSQNFDLKE IFCDENLIRE LDVSHIKVLT TLEAQKNKLK FLDMSKNTSL ITLYCHENEL TYLNTDNCKN LKFLSCSENA LTSIDISSNP ILRKLWCANN KLKNIDLSKN VNLTFLVLNN NLLSELDISN NPSLKEFWCY KNNLSNLSLD GHENLEILSC YDNQLNSLDI SHLPELQECY CYNTNISELD VSKNNKLIRL SCGKNNLSQI NCSNLKDLEF LYVSENSLSA LDITQNLNLT ELDCGGNMLT ELNINSNRKL KELYCRNNKL KALNTSNNVK LIYLYCKQNE ITDIDLTKNT ELQFLSVSEN RLKFLNLRNN VKLEKLWCYD NLLMGLSVLN NKNIKLISCY NNQIKEKEMD RLIKSLPTRS SEENGRFYVV DRRENSTDNN ICTIQQVNDA KKKHWNVLKS DSGEFTGH
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