Gene TDE0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0194 
Symbol 
ID2741613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp230829 
End bp231971 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content39% 
IMG OID637159063 
Producthypothetical protein 
Protein accessionNP_970810 
Protein GI42525712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA GAAAGTTTTT ATGGATTCTT GTTGTCGGAT TTCTTTCTGT TTTTCTTGAG 
GCTGAGGACT TAAGCCTTTC AAAAGAAGAT TTGCTTGTTA TACAAAACCC TAAGGGCGGC
TACCATTTAT ATATAAAAGC CAAACCCGAT ATAAAAAGTG TGCTTTTAAC GGAGACGACA
AAGGATCCCG ATTTAAAATT GGATAACTAT GCCTACCGTG ATCCCAATTA TAATGAAATA
AACGGAGATG AAAAAAGGCT TTTAAACGGT GAATTTTTGC TGCCCGAAAA AAGACTTTAC
AGTCTTATAG ATTCTACTCC CGAAAAAAAT ACGCCTCTGG GGGAGGCCTA TCATATTTGG
ATTCCCTATA TAATTTTATA CGGATATGAT TGGTCGCGAA GCGGCGAAAT CGAAGTAAAA
GACGGAACCT TTTTTAATAT ACGCACCTTT GCAAAACCTT ACGGAGATTA TACGGGAAAT
TTTCAGGACA ATCCTTTTAC CTTGCGGGTA ACCCAAAAAC CTGTTGAAAA AGACCCTCCC
CCTGATCTTT CGTATAGTGA TGAGGCCGTA AAAACTTTTA CGGATTTAGC CGACACAACC
GAAGGAGAAA TGATTTATGC AAAGGGGCCT GAGGATATTC TTTCAACAAT AAAAGAAATT
TTAAAAAAGG GAGAAAAGGA CCATCTTGAT TTACTCTTTG CTTTAGATTC CACCGAGAGT
ATGAAGGATG ATGTTGAAGA AGTGCGTAAA AATATCAGCT CAATGCTTGC CGAGACTTTG
CCTCAATATA AAACTTATAG AATAGCCTTG GTTTTATACA AGGATTACCG TGAAGACTTT
TTAGTGAGGG AAGCCTGCGT TTTTACCGAT AATTTAAAAA AATTTGAAAA AGCCTTATAC
GGCTTTAAAG TTTTCGGAGG GCGGGATATT CCCGAAGCCG TATATGAGGG TATCTTCTTA
GGGCTTCGTC AGTCATGGCG CGCCTTAGAT GCCGATGTTG ATAAAAAACT TATTCTTATA
GGAGATGCTC CTCCCCATCC CAAGCCTCGA GGCAAGGTAA CAAAAGAAGA TGTAGATAAA
CTTGCTGCAG AAAAGGGAGT AAAGATTTAC CCCATAATAT TGCCGCATTC TTTGTCGTAT
TAA
 
Protein sequence
MQKRKFLWIL VVGFLSVFLE AEDLSLSKED LLVIQNPKGG YHLYIKAKPD IKSVLLTETT 
KDPDLKLDNY AYRDPNYNEI NGDEKRLLNG EFLLPEKRLY SLIDSTPEKN TPLGEAYHIW
IPYIILYGYD WSRSGEIEVK DGTFFNIRTF AKPYGDYTGN FQDNPFTLRV TQKPVEKDPP
PDLSYSDEAV KTFTDLADTT EGEMIYAKGP EDILSTIKEI LKKGEKDHLD LLFALDSTES
MKDDVEEVRK NISSMLAETL PQYKTYRIAL VLYKDYREDF LVREACVFTD NLKKFEKALY
GFKVFGGRDI PEAVYEGIFL GLRQSWRALD ADVDKKLILI GDAPPHPKPR GKVTKEDVDK
LAAEKGVKIY PIILPHSLSY