Gene TDE0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0187 
Symbol 
ID2741034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp223985 
End bp224752 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content36% 
IMG OID637159056 
Productcarboxylesterase, putative 
Protein accessionNP_970803 
Protein GI42525705 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTTG ACAATTATCC TATCAAACTT TCAGATACAA CAAAACCCTT TTTTTTAAAA 
GGCCTGAAAA CCGCTCCGGC TATTTTGCTG ATTCATGGTT ACACGGGTTC TCCCAGAGAT
ATGATTTGGC TGGGGCATCA GCTAAATGAA GCCGGCTACA ATATATATAT TCCTCGGCTT
CCCGGACACG GCACAAATAA GAATGATTTT TTGACTACTA ATTGGAAAGA TTGGCTCCGT
AAGGTTTGTG ATGAGTATAT TGACCTCTGT GCAATGTATG AACGAGTTTT TGTAGGAGGC
CTTTCAATGG GAGGGGTATT AACCTCTCTG ATTGCAGCCC GTTTTAACCC TGAAAAGATA
TTTTTATGTG CTCCGGCTTT TATAGCAGCG GATAATCGAA TAAAACTTAC TCCTTTTTTA
AAGTTTTTTG TCAAAAAGAT AGCAACCGTC AAAAAAACTT ATGAAAATGA CCCCGAATAC
GGCAGAGCCA TATCGGACTA TAACGGTGTA GAATACTTAG CAAAAACGGC TGACCTTTAT
AAATTACAAA GATTAGCCTT AAAAAATATG GTTTTTATAA GATCGCAAAG CCTTACAGTC
TTATCAAAAG CCGATAAATT GGTGCCCTTT AAGGTAAAAG ACCTCATAGA TAAGACTTTA
AGAAATCAAA ACGACTATCT AATCCTTGAA AAAAGCAGTC ACATAGTTAC AAATGATGTT
GAAAAAGAGC TTGTAGCAAA AAAAATAATA GAATTCTTAA AGGATTAA
 
Protein sequence
MFFDNYPIKL SDTTKPFFLK GLKTAPAILL IHGYTGSPRD MIWLGHQLNE AGYNIYIPRL 
PGHGTNKNDF LTTNWKDWLR KVCDEYIDLC AMYERVFVGG LSMGGVLTSL IAARFNPEKI
FLCAPAFIAA DNRIKLTPFL KFFVKKIATV KKTYENDPEY GRAISDYNGV EYLAKTADLY
KLQRLALKNM VFIRSQSLTV LSKADKLVPF KVKDLIDKTL RNQNDYLILE KSSHIVTNDV
EKELVAKKII EFLKD