| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0154 |
|---|
| Symbol | |
|---|
| ID | 2741742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 176298 |
|---|
| End bp | 178376 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637159024 |
|---|
| Product | adenylate/guanylate cyclase catalytic domain-containing protein |
|---|
| Protein accession | NP_970771 |
|---|
| Protein GI | 42525673 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.152136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTAG AAAAGAAACG GTTATTTTTA GGATCTATTC CTTTTTGTTT TCTATTGATT
CTTTTGTGTC TAACTAATTT GTTTAAACCT ATTTATGAAC AAAAAGTCAT AAATTTGGAA
GTAAAAAACG GTAAAGTGAG TCTTCCTGCT AAGACCTTAT CAGGGACGGC CCTTTTTTCT
TTAAGCGGAG ATTTCCATTA TACGCCTAAT CAATTTTATT CTTTAAGAAA CAGCACTGAA
GAATCTTATG CTAAGGTCCC CGGTGATTTT TCAAGTAAAG ATTTAGAGAA TGTGTTTGGT
TACGGGTCTT ACGGTTTAGA ATTATATGGT ATGGATCCGG AAACTATTTA TGCAATTCAA
GTCCCCCTTA TTTTTAGCAG CTGCAGTATT GTAATAAATG GAATGGATCT TGAAAGGCAG
GGGCAGCCCG GTATAGATCG GGAAACGGAA AGACCGGGAA CCAGATCTTC TCAAATAGCT
TTTAGGCCCT TAAAAGATGG AACCTCCAAT ATAGTTATTA ATGTTTCCAA TTTTTTTAAT
AATAAAGGTT ATATTTCAGG CCCGATTATT TTGGGGGAGT CCACTCAAAT AGGAACAATG
TTTAAAGAAG ACCTGATTTT TTCCGGTATG ATATTTGCCG TAACTTTTTC GGTTGCTTTA
TTTTTCTTTA TGCTGTCATT TTTTCATAAA GATTCATCCT TTGTAATTTG GTTTGCTTTG
ACCTGTATAG TGCTGGCTTT GCGAGGGATT TTCTTTTATC CTTATATTTT TGATATTTTA
TTTCTCAATA CTCCATGGTT ATTTAATTTT ATTATGAGGT GTGTTACCGT TCCTCTGCCT
ATAATTTTAT TTACGATTTT TATAACTAAG GCTTTAAAAT TACGATTTAA GATTCCTTAT
ATAATTATAT TATCCGTATC AATTTTATAT GCTATTTCCA CTATAGTTCT TCCGCCTGAG
ATTTCAACAT TTTTATTGGG TTACTACCAA GTTTTTGCTT TGTTTTGTGT AAGTTATATT
ATCAGTATTG CAATAATAGG TTTGAAAAAA AAGAAAGAAT TTTCCGTATG GATATTTACT
GCGACATCTG TATTGTTCTT ATTCGGTGTT TATGACTTAT TTGTTTCTTT AGGCATTATA
TCGGGAGATT TTTTTATTCA GATAGGGACG GTTTTTGCGG TTATTATATT GTCTATAATG
GTCTTGGATG ACTATTCCGG TTCGATAACT AAGATAGAAG ATCTAAGTGT AGAAATGAAG
CTTATAAATA GATCTCTTAT TCGGTTTGTA CCGGATCAGA TTGTAGAGCT TTTGAATAAA
AAGTCCATAG CGGATGTTCA ACTGGGAGAT AGTGTTGAGC TTACAATGCC CATCATTTCG
ATAGATATCC GTTCCTTTAC TCACACTTCA GAAAAACTTG CACCCAATCA AGTTTTTGAA
TTATTGAATG AGTATTTTGC ATTGGTAGCT CCAATTGTTC GGAAATATAA TGGTGTAATA
ACAAAATACT TGGGAGACGG TTTTTTTGCT TTATTTCCTG ATGGAGCAAA CGCGGCTCTT
TCATGCGGAA TAGCTATACA AAAGGCTATT CGCGATAATA GTATTGCAGC ACCTAACTCT
TCCCCTATAA AAATAGGGAT AGGAATTGAT ATGGGTGATA TTCTTTTAGG TATCATAGGC
AATTCAACAC GAATGGATAG TATTATTATT TCTAACGCCT ACCACATCGC AGAAGTTTTG
CAGGAATCTA CAAAAAAATA CTCTTCCTGC ATTATTATTT CTGATAGAAT TTATGATTCT
CTTAATGATA TTTCTGAACA TTATATTAGG CCCATACAGA AGATTAAAAA TACATTGAAC
AAAGATGTTT TTTTATATGA AGTATATGAT GGTGATGATG ATTCTATTCG TGATTTAAAA
TACAGCACAC AGCACTATAT GGAAAATGCT TTAAAGGTCT TATCGACTAA GGGAGTTGAA
GCCGCCGGTA AATATTTTGA TAAAATTTTG GAAATATTTC CAAATGATTA TGTTGCCTTA
TATTATAAAA AAATGTTTGA AAAAATCAAT TTAGAATAA
|
|---|
| Protein sequence | MTVEKKRLFL GSIPFCFLLI LLCLTNLFKP IYEQKVINLE VKNGKVSLPA KTLSGTALFS
LSGDFHYTPN QFYSLRNSTE ESYAKVPGDF SSKDLENVFG YGSYGLELYG MDPETIYAIQ
VPLIFSSCSI VINGMDLERQ GQPGIDRETE RPGTRSSQIA FRPLKDGTSN IVINVSNFFN
NKGYISGPII LGESTQIGTM FKEDLIFSGM IFAVTFSVAL FFFMLSFFHK DSSFVIWFAL
TCIVLALRGI FFYPYIFDIL FLNTPWLFNF IMRCVTVPLP IILFTIFITK ALKLRFKIPY
IIILSVSILY AISTIVLPPE ISTFLLGYYQ VFALFCVSYI ISIAIIGLKK KKEFSVWIFT
ATSVLFLFGV YDLFVSLGII SGDFFIQIGT VFAVIILSIM VLDDYSGSIT KIEDLSVEMK
LINRSLIRFV PDQIVELLNK KSIADVQLGD SVELTMPIIS IDIRSFTHTS EKLAPNQVFE
LLNEYFALVA PIVRKYNGVI TKYLGDGFFA LFPDGANAAL SCGIAIQKAI RDNSIAAPNS
SPIKIGIGID MGDILLGIIG NSTRMDSIII SNAYHIAEVL QESTKKYSSC IIISDRIYDS
LNDISEHYIR PIQKIKNTLN KDVFLYEVYD GDDDSIRDLK YSTQHYMENA LKVLSTKGVE
AAGKYFDKIL EIFPNDYVAL YYKKMFEKIN LE
|
|---|
| |