Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0130 |
Symbol | |
ID | 2739442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 150685 |
End bp | 152058 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637159000 |
Product | sodium/dicarboxylate symporter family protein |
Protein accession | NP_970747 |
Protein GI | 42525649 |
COG category | [R] General function prediction only |
COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000347492 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATAA TCTGGATATG CGGCATTGTA GCCGCAGCAT TGTTACTCAT GTATGGAATT AGATACATGA AAAAACTTAA TATGAGCTTT AATGTACGTG TAGTTACAGC TCTTGTTGTA GGCATCATCT TTGGTGCAAT ACTACAGCTT ACAGTTAAAG ATTCAGCTCT GATAAAAAAA GCTATGAGCT GGATTACTTT AGTAGGAAGC GGTTATGTAA GATTGCTTAG AATGATTGTT TATCCTCTAA TCATTGTAAG CATTACAAAA TCAATTGCTA CACAAAAACA AAATATCGGA AAAGCAGCAG GAAGAATTTT AGCTGTTCTT GTAATCACTG TTGCAATAGC AGCACTTGTG GGAGCTCTTA CAACTTCTGC GTTCGGCTTG TCGGCAGAAA ATCTTACAGC CGGTGAAAGT GAAATTGCAA GAGGAAAGGC AATGGAAGGC AGACTTCATG ACTTTGAGGC AAAACCGATT CAGCAGCAAA TTCTTGAAAT TATCCCGACC AACCCCTTCT ACGCATTTTC AGGTCAAGGC TCAAATGCAA CCTTGGCTAC GGTTTTCTTC TCGGCAATGC TTGGCTTTGC AGCCTTATTC TTAAAAAGAA GCAATCCCGA CAGTGCAGAC GTATTTATTA AATGGCTTAA TTCTTGCTCC GATGTAGTAA TGAGGCTTGT CCGAATGGTT CTCCGCATTA CGCCTTACGG AGTTTTGGCT CTTATGATTA ATATCACCTC AACCTCAAAT TTCTCTGAAA TTTTAAGGCT TATCGGATTT ATAGGAGCAA GCTATATTGC AATTATAATA ATGTTTGTTG TACACGGATT ATACTTGCTT ACGGCAGGAT TAAACCCCAT AACCTTCTTT AAGAAAAGTG TTTCAAACCT CATGTTTGCA TTTACATCAA GGTCTTCCGC AGGAGCTCTT CCTCTTACCG TTTCAAACCA AGTAAACAAC TTAGGAGTTC CGGAAGGTAT CGCTAACCTT GCAGGAAGTT TAGGTACAAG TATCGGACAA AACGGATGTG CAGGAATTTA TCCTGCGATG TTGGCTGTTA TGATTGCACC CACTTTAGGA ATCAATCCAT TGGCACCCGT CTTCCTTGTA AAGCTTATCG TAATTACAGC CTTGGGAAGT TTCGGAATCG TTGGTGTAGG AGGCGGAGCA ACATTTGCCG CAATCATAGT TCTATCCTCA ATGGGACTTC CGATAACTCT TGCCGGTCTT CTTGTTGCTA TTGAACCCCT CATCGACATG GGCCGAACAG CCTTAAACGT AAGCGATTCT CTTCTTTCAG GTGTAATTGC AGCAAAAAGA ACAGGTGAAT TGGATGAATC TATCTATAAC AGAAAAGAAA TCATTGTTGA ATAA
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Protein sequence | MDIIWICGIV AAALLLMYGI RYMKKLNMSF NVRVVTALVV GIIFGAILQL TVKDSALIKK AMSWITLVGS GYVRLLRMIV YPLIIVSITK SIATQKQNIG KAAGRILAVL VITVAIAALV GALTTSAFGL SAENLTAGES EIARGKAMEG RLHDFEAKPI QQQILEIIPT NPFYAFSGQG SNATLATVFF SAMLGFAALF LKRSNPDSAD VFIKWLNSCS DVVMRLVRMV LRITPYGVLA LMINITSTSN FSEILRLIGF IGASYIAIII MFVVHGLYLL TAGLNPITFF KKSVSNLMFA FTSRSSAGAL PLTVSNQVNN LGVPEGIANL AGSLGTSIGQ NGCAGIYPAM LAVMIAPTLG INPLAPVFLV KLIVITALGS FGIVGVGGGA TFAAIIVLSS MGLPITLAGL LVAIEPLIDM GRTALNVSDS LLSGVIAAKR TGELDESIYN RKEIIVE
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