Gene TDE0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0130 
Symbol 
ID2739442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp150685 
End bp152058 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content40% 
IMG OID637159000 
Productsodium/dicarboxylate symporter family protein 
Protein accessionNP_970747 
Protein GI42525649 
COG category[R] General function prediction only 
COG ID[COG1823] Predicted Na+/dicarboxylate symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000347492 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATAA TCTGGATATG CGGCATTGTA GCCGCAGCAT TGTTACTCAT GTATGGAATT 
AGATACATGA AAAAACTTAA TATGAGCTTT AATGTACGTG TAGTTACAGC TCTTGTTGTA
GGCATCATCT TTGGTGCAAT ACTACAGCTT ACAGTTAAAG ATTCAGCTCT GATAAAAAAA
GCTATGAGCT GGATTACTTT AGTAGGAAGC GGTTATGTAA GATTGCTTAG AATGATTGTT
TATCCTCTAA TCATTGTAAG CATTACAAAA TCAATTGCTA CACAAAAACA AAATATCGGA
AAAGCAGCAG GAAGAATTTT AGCTGTTCTT GTAATCACTG TTGCAATAGC AGCACTTGTG
GGAGCTCTTA CAACTTCTGC GTTCGGCTTG TCGGCAGAAA ATCTTACAGC CGGTGAAAGT
GAAATTGCAA GAGGAAAGGC AATGGAAGGC AGACTTCATG ACTTTGAGGC AAAACCGATT
CAGCAGCAAA TTCTTGAAAT TATCCCGACC AACCCCTTCT ACGCATTTTC AGGTCAAGGC
TCAAATGCAA CCTTGGCTAC GGTTTTCTTC TCGGCAATGC TTGGCTTTGC AGCCTTATTC
TTAAAAAGAA GCAATCCCGA CAGTGCAGAC GTATTTATTA AATGGCTTAA TTCTTGCTCC
GATGTAGTAA TGAGGCTTGT CCGAATGGTT CTCCGCATTA CGCCTTACGG AGTTTTGGCT
CTTATGATTA ATATCACCTC AACCTCAAAT TTCTCTGAAA TTTTAAGGCT TATCGGATTT
ATAGGAGCAA GCTATATTGC AATTATAATA ATGTTTGTTG TACACGGATT ATACTTGCTT
ACGGCAGGAT TAAACCCCAT AACCTTCTTT AAGAAAAGTG TTTCAAACCT CATGTTTGCA
TTTACATCAA GGTCTTCCGC AGGAGCTCTT CCTCTTACCG TTTCAAACCA AGTAAACAAC
TTAGGAGTTC CGGAAGGTAT CGCTAACCTT GCAGGAAGTT TAGGTACAAG TATCGGACAA
AACGGATGTG CAGGAATTTA TCCTGCGATG TTGGCTGTTA TGATTGCACC CACTTTAGGA
ATCAATCCAT TGGCACCCGT CTTCCTTGTA AAGCTTATCG TAATTACAGC CTTGGGAAGT
TTCGGAATCG TTGGTGTAGG AGGCGGAGCA ACATTTGCCG CAATCATAGT TCTATCCTCA
ATGGGACTTC CGATAACTCT TGCCGGTCTT CTTGTTGCTA TTGAACCCCT CATCGACATG
GGCCGAACAG CCTTAAACGT AAGCGATTCT CTTCTTTCAG GTGTAATTGC AGCAAAAAGA
ACAGGTGAAT TGGATGAATC TATCTATAAC AGAAAAGAAA TCATTGTTGA ATAA
 
Protein sequence
MDIIWICGIV AAALLLMYGI RYMKKLNMSF NVRVVTALVV GIIFGAILQL TVKDSALIKK 
AMSWITLVGS GYVRLLRMIV YPLIIVSITK SIATQKQNIG KAAGRILAVL VITVAIAALV
GALTTSAFGL SAENLTAGES EIARGKAMEG RLHDFEAKPI QQQILEIIPT NPFYAFSGQG
SNATLATVFF SAMLGFAALF LKRSNPDSAD VFIKWLNSCS DVVMRLVRMV LRITPYGVLA
LMINITSTSN FSEILRLIGF IGASYIAIII MFVVHGLYLL TAGLNPITFF KKSVSNLMFA
FTSRSSAGAL PLTVSNQVNN LGVPEGIANL AGSLGTSIGQ NGCAGIYPAM LAVMIAPTLG
INPLAPVFLV KLIVITALGS FGIVGVGGGA TFAAIIVLSS MGLPITLAGL LVAIEPLIDM
GRTALNVSDS LLSGVIAAKR TGELDESIYN RKEIIVE