| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0129 |
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| Symbol | pyrB |
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| ID | 2739612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 148782 |
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| End bp | 150389 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637158999 |
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| Product | bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit |
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| Protein accession | NP_970746 |
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| Protein GI | 42525648 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain
[COG1781] Aspartate carbamoyltransferase, regulatory subunit |
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| TIGRFAM ID | [TIGR00240] aspartate carbamoyltransferase, regulatory subunit
[TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00714035 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA AATTTATGGG GCGTTCATTG ACGGTTATCG ATGACTTATC AATCGATGAA
AGAAAATACC TTTTTGACAA GACAAAGCGC TTAAAAAAAG CCATTCAAGA AGATGATCAA
AAGGTTATGG ATGAATTTAG AATTAACGAC AAAGATTTCG GTATTTATGA GGTTTTTTTG
GAACCCAGTA CCCGCACAAA GGAATCATTT AGGAATGCAG CCAAATTTCA TCAAGTAAAG
TTAAGTGATT TAGCCGCTGA ATCTTCCTCT TTTAACAAGG GAGAAAGCTA TGCCGACACC
TTTAATACTC TTGCCGGATA TCAAAACAGC ATTTTTATCG TACGCAGCAA GGTAGAGGGG
GTATGCCGCT GGCTTGAAGA TGAGGCTCAA GCCTTTTATC AAAGAAATAA CTTAAAAAGA
AAGCCTGCCT TTATAAACGC CGGAGACGGA AAGCATGAGC ATCCTACTCA GGAGCTGCTT
GACGAATTTA CCTTTATCGA AGATAATAAC TGGTCATTCG ATAAGATTCA CATAGCCTTA
GTAGGCGACT TGTACCACGG AAGAACTGTA CACTCAAAGG CCGACGGTCT TAAAATCTTT
AAGTCCGTAA AGGTTGACCT TATAGCTCCT GCCGAACTTG CTATGCCTGA ATATTACAAG
GTCAGGATGC AGGAAAACGG CTTTACCGTA AGGGAATTTT CTTCGATAGA GGAATATCTG
AGACAAGCCG ATGTCGCTCT TATTTGGTAC TTTACCCGCC CCCAGCTTGA AAGAATGGGT
GAGCAGGTTT TAAAAAAGCA AGACGAGCTC CGCCGCTCCA TAACTTTCCG AAAAGAATTT
ATCGAAAAAC TTCCCGAAAA TACCCGTTTT TATCATCCCC TCCCAAGACA CCGCGTACAT
CCGACTATTC CCACTTTTTT GGATGCAACC CCCCTTAACG GTTGGGAAAG ACAGTCCATA
AACGGAATGT ACGTAAGAAT GGTTCTTCTT TCGATGATAG CAGGTAAAAT AGGCGATGAC
TATAAGGGGC CTGAACCTAA ATCTTGTGAA CGTGTCGAAG ATGAAGACTA CATAGTTGAA
GTTCCCATAA ATAATTCCAA AGAAAGCAAG GTTGAAACCT TTTCCGAAGG TGTACGCCCT
ATACAAAACG GAATAGTTAT TGACCATATT TGCCGAGGAG ATAAGCCCTC AGTAATAAGA
CATCACATGT CCAAGATTAT AAATGTTATG GGACTTGAAG AAGGCAAGGG CGGCGAATGG
GTATCCACTT CTACAAAAGA TAAGGGAACT TTCAAGGGAA TTATTTTCCG ACCGGGAGAG
TATAAGTTTT CGAGGGCGGA TTTAAAGAGG CTGTCTGCCG TTGCTTCGAG CTGCACCCTT
AACCTAATAA AAGACGGAAA AATTCAGTCA AAGTATAGGA CGCACCTTCC TCCGCGTATT
TATAATTTTG AAGATTTAAT TTGCAAGAAC GAGGCCTGTA TTTCACATCC GGCTCAATCC
GAAGGCGTCC CCGCCATTTT TTACCGCACT ATAGACAACA GATATGCCTG CCAATATTGC
GGAACAATCC ATACCTTTAA AGAAATATGG GGCGAAAAAA AGAACTAA
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| Protein sequence | MENKFMGRSL TVIDDLSIDE RKYLFDKTKR LKKAIQEDDQ KVMDEFRIND KDFGIYEVFL
EPSTRTKESF RNAAKFHQVK LSDLAAESSS FNKGESYADT FNTLAGYQNS IFIVRSKVEG
VCRWLEDEAQ AFYQRNNLKR KPAFINAGDG KHEHPTQELL DEFTFIEDNN WSFDKIHIAL
VGDLYHGRTV HSKADGLKIF KSVKVDLIAP AELAMPEYYK VRMQENGFTV REFSSIEEYL
RQADVALIWY FTRPQLERMG EQVLKKQDEL RRSITFRKEF IEKLPENTRF YHPLPRHRVH
PTIPTFLDAT PLNGWERQSI NGMYVRMVLL SMIAGKIGDD YKGPEPKSCE RVEDEDYIVE
VPINNSKESK VETFSEGVRP IQNGIVIDHI CRGDKPSVIR HHMSKIINVM GLEEGKGGEW
VSTSTKDKGT FKGIIFRPGE YKFSRADLKR LSAVASSCTL NLIKDGKIQS KYRTHLPPRI
YNFEDLICKN EACISHPAQS EGVPAIFYRT IDNRYACQYC GTIHTFKEIW GEKKN
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