| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0125 |
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| Symbol | |
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| ID | 2741740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 142985 |
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| End bp | 144100 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637158995 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | NP_970742 |
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| Protein GI | 42525644 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA CTCCAAATGA AAAATTATTA AAAAAGGCAT TGCACTCATG CAATAATAAA
AAATATGCCG ATAAAATTCT TCATCAGGAA AAAGAAATAT TTGATTTAAA ACAACTGCTG
CAAATTTCAA AAAGTTTAAA TTCTGTTTTG GAATTTGACC GTCTTATTGA AGCAATATTA
TATATAGTTA TGGCTCAGCT AAAAACCCTC GGAGCCGCAA TTTTTACAAA AAAATCCTTT
GATGATAACC TTTTTGTATT AAATAGGGAC CATTACGGTT TTGATATAAT CCGCGATGCT
CAATATTCTA TAAATGTAGA TCATCCGCTT ATAAATTTTT TGGATAAATC CGATTCGGGA
TGCACTCCCG ATGAGATAAG TAAGAACATA AAAACGGATA AGATAGTAAA AGACTTATTC
AGTCTTAGCC CTTCTTTTTT TGTACCCCTA AAAGCAAAAA ATAGGATGAT AGGCTTTTTG
CTTTTAGGTG AAAAAATGGA AAGTTCCCAT CAATTTACGG ATTATGAAAA AAACATTATA
GAAAACATAG CTTCCTTAGC TGCTATAGCC ATAAACAATT CTCAGCTTTT AGAAATGACT
ACAACCGACA TAATGACTCA CCTAAAACTA AAGCATTATT TTTTTACTCT GTTGATGGAG
CATTTGTATA CTATAAATTC TTCAGGCGAA AAAAAAGAAA CTCTTTCAAT TTTGATGATT
GATATAGACT TTTTTAAGAA TATAAACGAT ACCTATGGTC ATGCTGCCGG AGATATTGTT
TTAGAAGAGG TTGCAAAAAT TATAAAATCA TGTACAAGGA ATGCAGATAC GGCTGCAAGG
TATGGCGGAG AAGAATTTAT AGTAATGCTT AACAATACTT CGGCTAGCGC TGCTATGGCT
GTAGCCGAAA GAATAAGAAA ATCCGTAGAA GAGAAGTCCA TTATGTACGA CGGTAAAAAA
ATTAATGTAA CTATTTCCAT AGGGGTATCA AGTTATAACT TTGATCTTGA GTCGGCAAAG
TCTATAGTTG AAAGAGCTGA CAAGGCCCTA TACGAATCCA AGCAAAACGG ACGGAATCGT
GTAACATTAT CCAAAAATAA CTTGCCTAAA GCTTAA
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| Protein sequence | MKTTPNEKLL KKALHSCNNK KYADKILHQE KEIFDLKQLL QISKSLNSVL EFDRLIEAIL
YIVMAQLKTL GAAIFTKKSF DDNLFVLNRD HYGFDIIRDA QYSINVDHPL INFLDKSDSG
CTPDEISKNI KTDKIVKDLF SLSPSFFVPL KAKNRMIGFL LLGEKMESSH QFTDYEKNII
ENIASLAAIA INNSQLLEMT TTDIMTHLKL KHYFFTLLME HLYTINSSGE KKETLSILMI
DIDFFKNIND TYGHAAGDIV LEEVAKIIKS CTRNADTAAR YGGEEFIVML NNTSASAAMA
VAERIRKSVE EKSIMYDGKK INVTISIGVS SYNFDLESAK SIVERADKAL YESKQNGRNR
VTLSKNNLPK A
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