Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0113 |
Symbol | |
ID | 2741728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 132755 |
End bp | 133669 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637158983 |
Product | tpl protein |
Protein accession | NP_970730 |
Protein GI | 42525632 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTATG ATATTAACGA AAATATAGAA GATATTGAAT CTCTTGAAGA TAAAGATCAA AGACCTGTAA AAATGAGCTC AAATCCCAAC GATTTTCCTC AACCCCTATA TGAGCTTAAT TTGGATTACT CAAAAGAAAG CTTTTATGCG ACAGCTGATG AACATCAAGA ATTTAAGACG GGCGACTTTG TTCTTGTGCC TACACGGTAC GGTAATGATG CAGCCCGCTT CGGAGGTCCT GTCAAGGCTC CCATCAATGC CAATCCAGAT GAGGTTGTAA AAATTATTCG AAAAATAAAT GCTGAAGAAG AGATTATCTT AGAGGAAAAC AACAAAAAAG AAAAAGAAGC TGCCAAGATT TTTAAAGAAA AGGTTGCCTT AAATAACCTG GAAATGAAGT TTATAGGCTG CCATTTTTTA CTTGATGAAC CTAAGGTATT GTTCTTTTTC AGTGCCGATA CTCGGATTGA TTTTAGAAAA TTGGTCAAAG ATCTTGTTTC CGTCTTTAAA ATAAGAGTTG AATTAAGACA AATAGGCGTT AGAGATGAAT CCCGCATTAT AGGAGGCCTC GGCTGCTGCG GACGGCCCTA TTGCTGTCAT AACGTAACCG ATAAACTCAA ACCTGTTTCT ATAAAAATGG CAAAGGAACA AAACCTATCG CTCAATTCAT CAAAAATATC GGGACAGTGC GGAAGGTTAT TATGCTGCCT CTCTTATGAA TATGATTGGT ATGCAGAAGC TAGAAGATTA ATGCCGCCTG AAGGCGCAAG ATTCCCATAT GACGGCACAA CCTTTAAGAT TACCGAGGTA AACCTTCTTA CCCAAATGGT TTCCTTATTG GGAGAAGACG GACGAATCCT TTCTTTGCCC TCAAAGCGTG TGGTCAATAT CGGAGGAAAG TGGCAAGTAA GATAA
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Protein sequence | MDYDINENIE DIESLEDKDQ RPVKMSSNPN DFPQPLYELN LDYSKESFYA TADEHQEFKT GDFVLVPTRY GNDAARFGGP VKAPINANPD EVVKIIRKIN AEEEIILEEN NKKEKEAAKI FKEKVALNNL EMKFIGCHFL LDEPKVLFFF SADTRIDFRK LVKDLVSVFK IRVELRQIGV RDESRIIGGL GCCGRPYCCH NVTDKLKPVS IKMAKEQNLS LNSSKISGQC GRLLCCLSYE YDWYAEARRL MPPEGARFPY DGTTFKITEV NLLTQMVSLL GEDGRILSLP SKRVVNIGGK WQVR
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