Gene TDE0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0113 
Symbol 
ID2741728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp132755 
End bp133669 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content39% 
IMG OID637158983 
Producttpl protein 
Protein accessionNP_970730 
Protein GI42525632 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATG ATATTAACGA AAATATAGAA GATATTGAAT CTCTTGAAGA TAAAGATCAA 
AGACCTGTAA AAATGAGCTC AAATCCCAAC GATTTTCCTC AACCCCTATA TGAGCTTAAT
TTGGATTACT CAAAAGAAAG CTTTTATGCG ACAGCTGATG AACATCAAGA ATTTAAGACG
GGCGACTTTG TTCTTGTGCC TACACGGTAC GGTAATGATG CAGCCCGCTT CGGAGGTCCT
GTCAAGGCTC CCATCAATGC CAATCCAGAT GAGGTTGTAA AAATTATTCG AAAAATAAAT
GCTGAAGAAG AGATTATCTT AGAGGAAAAC AACAAAAAAG AAAAAGAAGC TGCCAAGATT
TTTAAAGAAA AGGTTGCCTT AAATAACCTG GAAATGAAGT TTATAGGCTG CCATTTTTTA
CTTGATGAAC CTAAGGTATT GTTCTTTTTC AGTGCCGATA CTCGGATTGA TTTTAGAAAA
TTGGTCAAAG ATCTTGTTTC CGTCTTTAAA ATAAGAGTTG AATTAAGACA AATAGGCGTT
AGAGATGAAT CCCGCATTAT AGGAGGCCTC GGCTGCTGCG GACGGCCCTA TTGCTGTCAT
AACGTAACCG ATAAACTCAA ACCTGTTTCT ATAAAAATGG CAAAGGAACA AAACCTATCG
CTCAATTCAT CAAAAATATC GGGACAGTGC GGAAGGTTAT TATGCTGCCT CTCTTATGAA
TATGATTGGT ATGCAGAAGC TAGAAGATTA ATGCCGCCTG AAGGCGCAAG ATTCCCATAT
GACGGCACAA CCTTTAAGAT TACCGAGGTA AACCTTCTTA CCCAAATGGT TTCCTTATTG
GGAGAAGACG GACGAATCCT TTCTTTGCCC TCAAAGCGTG TGGTCAATAT CGGAGGAAAG
TGGCAAGTAA GATAA
 
Protein sequence
MDYDINENIE DIESLEDKDQ RPVKMSSNPN DFPQPLYELN LDYSKESFYA TADEHQEFKT 
GDFVLVPTRY GNDAARFGGP VKAPINANPD EVVKIIRKIN AEEEIILEEN NKKEKEAAKI
FKEKVALNNL EMKFIGCHFL LDEPKVLFFF SADTRIDFRK LVKDLVSVFK IRVELRQIGV
RDESRIIGGL GCCGRPYCCH NVTDKLKPVS IKMAKEQNLS LNSSKISGQC GRLLCCLSYE
YDWYAEARRL MPPEGARFPY DGTTFKITEV NLLTQMVSLL GEDGRILSLP SKRVVNIGGK
WQVR