Gene TDE0112 details

Gene Information

• Locus tag: TDE0112
• ID: 2741727
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 132184
• End bp: 132744
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637158982
• Product: hypothetical protein
• Protein accession: NP_970729
• Protein GI: 42525631
• COG category: [S] Function unknown
• COG ID: [COG1728] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAACT CCGTGGATAC AAGCAACTAT GTTTCCGCTC TTAATACCGC CGCGCCTCTA 
ATAGCCAAAG ATTCGCACAT TCAAAAAAAT CAAACACGAA AAACGGAAAA TACCAAAGTA 
AAAAAGCAAA AAACTTTTTT AGATACAATT TTGGATAGCA ATATTCAGGA GTCTGAGGAA 
TCCTATTACG AAAAAAAACT GGAAGGTCTT AATCCTGAAG AAAGAAAAAA AGCTGTAGAC 
GATATTTTGG CCGTCTTACA GGATGAGGTT TATTCCAGCG GGGCTAATCT GGCCGAGAAC 
GTAAATGAGG AAACAATAAA CAAATATAAA AAAGCAGTCA AAAGCTTTGT AAACTTTGCA 
CTTCAACATT CACTTAATGT AAAAGCGGTG ACTTCAGGCG GTTTAAATCC GCTAAAACAG 
CGTAATTATG TAATAGTAAA AGTCATTGAT GAAAAAATAG ACAAACTAAC ACAGGAACTT 
TTATTTAATC AACTTGAAAA ACTGCAAATC TTAGCTAAAC TGGATGAAAT AAAAGGTCTT 
TTAGTCAACT TGACTACATA G 

 

Protein sequence

MGNSVDTSNY VSALNTAAPL IAKDSHIQKN QTRKTENTKV KKQKTFLDTI LDSNIQESEE 
SYYEKKLEGL NPEERKKAVD DILAVLQDEV YSSGANLAEN VNEETINKYK KAVKSFVNFA 
LQHSLNVKAV TSGGLNPLKQ RNYVIVKVID EKIDKLTQEL LFNQLEKLQI LAKLDEIKGL 
LVNLTT