| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0104 |
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| Symbol | |
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| ID | 2741719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 123773 |
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| End bp | 124804 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637158974 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | NP_970721 |
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| Protein GI | 42525623 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGTT TTAGTTTTAC AACGGTTCAA GGGACAACCG AAGTATTTTA CTGCGATGAG
CCTTTTGTAC CGCCTGTAGG TACAGCCGGC GGGATGTACA TCACCGATTC CAATACTGCT
CCCATTGCAA AGGGTGCAAG AAATTTTCGT TCGGACCTTC CCTTGGTTGT CATTGAAGCC
GGAGAAGAAA ATAAAAATTT TACTTCCCTT GTATCTATTT TAAAAGCCGC CCTTGATGCG
GGCTTAAGCC GGAATTCTGT TTTTATCGGG ATTGGTGGAG GTCTTGTCTG TGATTTGGCG
GCCTTTGCTG CCTCGGTTTA TATGAGGGGG GCAAAATGCA AACTTGTTCC TACCAGTCTT
TTAGCCATGG CGGATGCAGC CATCGGCGGA AAAACTGCAA TAAATTTTGA CGGTTATAAA
AACATGGTAG GAACTTTTTT TAAGGCTGAT GAAATTTACA TAAGCCCAAA GGTCTTAAAA
AGTTTAAGCG AGCCGGAGTA TCTTTCAGGA ATGTTCGAGA TATTTAAGAT GGGCCTTTTA
TACTCAAAAG ATATTTACCA AGTTTTTAGA ACACAAAGAG AAAAAATTTT TGCAAGAGAT
GAAGACCTTT GCTTGGACCT TGTTAAAATA GCTGTTGAGG CAAAAGCACT GGTTGTAAGC
CGCGACTTTG ACGAAAAAAA TGAAAGAGCT TTTTTAAACT TGGGGCATAC CTTTGGCCAT
GCGTTAGAAT CCGGTTTAAA TTTTTCAAAG ATTTCTCATG GGGAGGCTGT TGCTTGGGGA
ATATCAAAGG CGATGCTCTT AGGTAAAAAT TTAGGCTTAA CCGATTCTTC TTATGCGGAT
GAGGTTTGTG CTATTATACA TTCTTATAGC CGCATAGATG TACCGGTCTT ACAGGATAAG
GAGAAGGTGC TTTTAGCAAT GAAAAAAGAT AAAAAAAATA TGGACGGTAA AATCCGTTTG
ATTTTACAAA AAAATATTTG CGAGACTTTT ATTTATGAAG CCTTTGAAAA AGACATCAGG
GAGGTTCTAT GA
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| Protein sequence | MDSFSFTTVQ GTTEVFYCDE PFVPPVGTAG GMYITDSNTA PIAKGARNFR SDLPLVVIEA
GEENKNFTSL VSILKAALDA GLSRNSVFIG IGGGLVCDLA AFAASVYMRG AKCKLVPTSL
LAMADAAIGG KTAINFDGYK NMVGTFFKAD EIYISPKVLK SLSEPEYLSG MFEIFKMGLL
YSKDIYQVFR TQREKIFARD EDLCLDLVKI AVEAKALVVS RDFDEKNERA FLNLGHTFGH
ALESGLNFSK ISHGEAVAWG ISKAMLLGKN LGLTDSSYAD EVCAIIHSYS RIDVPVLQDK
EKVLLAMKKD KKNMDGKIRL ILQKNICETF IYEAFEKDIR EVL
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