Gene TDE0100 details

Gene Information

• Locus tag: TDE0100
• ID: 2741715
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 117064
• End bp: 119034
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637158970
• Product: hypothetical protein
• Protein accession: NP_970717
• Protein GI: 42525619
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.338515
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACAA TAAAGTTGGA CGATTTTAAA AATTACGAAT TTTTAAGTAA CCTTAAATTT 
TCGGAAGACG GAAGATATGC GGCCTATATT TGTGCTCATG CCGATCTAAC CGAAAATGAT 
TATCACAAGG CTCTTTTTCT TTTGGACATG GAAACAAAAA AGACAAAGCA GCTTACGGGC 
GAGGATGTAA ATTCTTTTTA CGGCTTTGAC GGCGATCGCC TCCTTTTTTC TGCAAGAAGA 
ACAAAAAAAG AAAAGGAAGA AAAAGAGAAA ACCTTTGTTT ATTCTATCCC CGTTTCGGGC 
GGTGAGGCCT TGCTTGCCTA CACCTTCCCC CATCCCGTTC TAAAAATGGA ATTTGCCGAT 
AAAAAGACGG CTGTTGTTTT ACACTCATGG AAGGATGACC CATTTAAAAA GCTGCCTAAA 
GAAAAGGCAG AAGAAGCAAA AAAAGATGAA GCCGATTATG AAACCTTTGA AGAGATTCCG 
TTTTGGAGCA ACGGAGGCGG CTTTACCTCG CGCAAGAGAA ACCGGCTCTT TGTTTATAAT 
CTTTCAAACA TGAAGGGTAC GGCCCTAACC GATGAGTTTA CTCAGGTTGA CGGTTTTGAT 
TTTGATAAAA AGACCCAAGA GATTCTATTT ACAAAATCAA CTTATACCGA TAAGATGCCC 
ATCTATAACG AGCTGATGCT CATGCCCTTA AAAACAAAAA AGGCAAAGCT CTTAAATGGC 
GGTCAAGATT TTATGTACAC CGATGCCAAA TTTTTCAAAG ATAAAATTAT TTATACGGGT 
GCCGACGGAA AAAAATACGG CGTAAACCAA GATGCCGATA TTTATCTTAT TCCCAAAACC 
GGAACAGGAG CGAAGATGAT TTCGCCCAAG GATTACGATA AGAGCTTGTG GAATTCCGTG 
GGTTCCGATT CAAGGTACGG GGGCGGAGCT AACTCCCATG TCAAAGACGG AAAATATTAT 
TTTATTACAA CCGAGGATGA TTCTTCCTTT TTAAATGTCA TTGACGAAAA AGGAGAATTA 
AAACAGCTTA TTACCGAAAA AGGTTCTGTA GACTGCTTTG CCGTTCATGA AGAAAAAATT 
CTTTTTATCG GTTTTAGAAA ACAGGAGTTA CAAGAAGTTT ATCTTTTTGA AGATAAAAAA 
GAAACCTGCC TAACAAAGCA TAATACCTAT GCTTCAAAGT TGCAAAAGAT TGTGCCCGAA 
GAATTCGAGT TTACAAATGA TGGGGTTAAA CTCCACGGCT TTGTTTTAAA GCCCTTAAAC 
TACAAGGCCG GAAAAAAATA CCCCGGTATC TTGACAATTC ACGGCGGACC TAAGACCGCT 
TACGGTTCAA TTTTTTACCA CGAGATGCAG TTTTTAGCTC AATCCGGTTA CTTTGTGTTT 
TATACGAATC CCCGCGGTGC CGACGGAATG GGCCGAGCCT TTGCCGATAT CCGGGGCAAG 
TACGGAACAA TCGACTACTC CGATTTAATG AAGCTTACGG ATGAGGTTCT AAAAAAGTAC 
AAGGATATCG ACAAGGAAAA AGTAGGCGTT ATGGGCGGCT CTTACGGCGG TTTTATGACA 
AACTGGATTA TCGGCCACAC AAACCGCTTT GCGGCAGCCT GCTCTCAGCG TTCTATTTCA 
AACTGGATTT CCAAATTCGG AATTACCGAT ATCGGTTATT ATTTTAATTC CGACCAAAAC 
GGAGGAGTTA CTCCTTGGAA GGGTGTAGAA AAAATGTGGG ATCACAGTCC GCTCAAGTAT 
GCCGATAAGT GCAAAACGCC GACCCTTTTT ATTCAGTCGG ATGAGGACTA CCGCTGCTTT 
GAGGCCTGCG CCTTCCAAAT GTTTACGGCT CTAAAATATC ACGGCTGCGA AGCAAAGCTT 
GTTTTGTTCC ATGGGGAAAA TCATGACCTC TCCCGAACGG GAAAACCCAA GCACAGAATC 
CGCCGCTTAA CCGAGATATT CAACTGGTTT GAAAAGTATC TTAAAAAATA A 

 

Protein sequence

MKTIKLDDFK NYEFLSNLKF SEDGRYAAYI CAHADLTEND YHKALFLLDM ETKKTKQLTG 
EDVNSFYGFD GDRLLFSARR TKKEKEEKEK TFVYSIPVSG GEALLAYTFP HPVLKMEFAD 
KKTAVVLHSW KDDPFKKLPK EKAEEAKKDE ADYETFEEIP FWSNGGGFTS RKRNRLFVYN 
LSNMKGTALT DEFTQVDGFD FDKKTQEILF TKSTYTDKMP IYNELMLMPL KTKKAKLLNG 
GQDFMYTDAK FFKDKIIYTG ADGKKYGVNQ DADIYLIPKT GTGAKMISPK DYDKSLWNSV 
GSDSRYGGGA NSHVKDGKYY FITTEDDSSF LNVIDEKGEL KQLITEKGSV DCFAVHEEKI 
LFIGFRKQEL QEVYLFEDKK ETCLTKHNTY ASKLQKIVPE EFEFTNDGVK LHGFVLKPLN 
YKAGKKYPGI LTIHGGPKTA YGSIFYHEMQ FLAQSGYFVF YTNPRGADGM GRAFADIRGK 
YGTIDYSDLM KLTDEVLKKY KDIDKEKVGV MGGSYGGFMT NWIIGHTNRF AAACSQRSIS 
NWISKFGITD IGYYFNSDQN GGVTPWKGVE KMWDHSPLKY ADKCKTPTLF IQSDEDYRCF 
EACAFQMFTA LKYHGCEAKL VLFHGENHDL SRTGKPKHRI RRLTEIFNWF EKYLKK