Gene TDE0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0093 
Symbol 
ID2741708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp111397 
End bp112368 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content39% 
IMG OID637158963 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase, putative 
Protein accessionNP_970710 
Protein GI42525612 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000598157 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATT TATTTAGTAT ACTTCATAAT ACCCCTTTAT TTCAAGAGGG AACTATAGAA 
TTCTATAAAC CCCTAAAGCC TCTTACATCA TACAAAATCG GAGGCCCTGC AGAAGCTCTT 
TTTTGTCCTA AAGATGAAGA CCATTTAAAA GAAGCCTTAA TTTTTTTAAG CAAAAATAAG 
ATTTCTGCCT CGTTAATAGG AGGCGGAACA AACATTCTTG TCTCCGATAA GGGGTTTAGG 
GGAGTTTTAA TAAGCCTAAA AAACTTAAAC AAGATAGAAA TCATAGGCGA ATCCGAAAAC 
AAGGTTTTTG TAAGAGCCGG AGCAGGCGTC CTCACCGATA AGCTTACAAA ATGGGCTGTT 
GAAAATTCTC TTTCAGGCCT GGAGTGTTTT GGAGGCCTTC CCGGAAGCGT CGGAGGGGCC 
GTATTTATGA ATGCACGCTG CTATGATGTT TCAATCTCGG ATAGGTTAAA ATCGATAAAA 
TATATCTTAG CCGATGGCGA TAAAACGGAA TTTGCAGAAT ATGAATATAA TCCTTCCGAT 
TGGGATTATA AGGCTTCGCC GTTTCAACAA AATCCGGTAA GTACCGAGAT TACAAAAAAT 
AGAAAGATAG TTCTTTCTGC CGTTTTTACC TTAACCCATG GAATAAAAGA AGAAATTGCT 
GTCAAAACCG AGGAAAAAGT TCAAGATAGA ATTTCAAAGG GACATTTTAA GGAACCTTCT 
GCAGGAAGTA CATTTAAAAA TAACAGAGCC TTCGGACTAC CCAGCGGCAA GCTGATAGAG 
GATGCCGGAT TAAAAGGTCT CTGCGAAGGA GGGGCTCAGG TCGCTCCTTG GCACGGAAAT 
TTTATAATTA ACAAGCATGA TGCTTCAGCC TCGGATATAA AAACTTTGAT AGAAAAGGTT 
CAAAAAACGG TTAAGGATAA GACAGGCTTT TTACTTGAAC CGGAAGTTAT TTTTGCAGGC 
GATTGGGGCT AG
 
Protein sequence
MNNLFSILHN TPLFQEGTIE FYKPLKPLTS YKIGGPAEAL FCPKDEDHLK EALIFLSKNK 
ISASLIGGGT NILVSDKGFR GVLISLKNLN KIEIIGESEN KVFVRAGAGV LTDKLTKWAV 
ENSLSGLECF GGLPGSVGGA VFMNARCYDV SISDRLKSIK YILADGDKTE FAEYEYNPSD 
WDYKASPFQQ NPVSTEITKN RKIVLSAVFT LTHGIKEEIA VKTEEKVQDR ISKGHFKEPS 
AGSTFKNNRA FGLPSGKLIE DAGLKGLCEG GAQVAPWHGN FIINKHDASA SDIKTLIEKV 
QKTVKDKTGF LLEPEVIFAG DWG