Gene TDE0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0087 
SymboltrkA 
ID2741702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp104079 
End bp105479 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content39% 
IMG OID637158957 
Productpotassium transporter peripheral membrane component 
Protein accessionNP_970704 
Protein GI42525606 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA TTATAGTTGG CGGCGGCGTT ACCGGAAGTG AATTAGCTCG CAGGCTCATA 
AGAAAAAAAC ATGATGTTGT TTTGATAGAA AGAGATGAAG AAACAGCCCG CCATGCAGCT
AATAGGCTGG ATTGTATGGT AGTACAGGCC GCAGGAAACG ATACTCAAAT CCTCTTGGAT
GCAGGCATAA AAAAGGCCGA AGCCATGATA GCCGTAACCG ACTCGGATGA ACTCAATATG
ATAATCTGCG GTATCGCGGA TAGTCTCGCC CCCCAAGTTA TAAAAATAGC AAGAGTCCGT
AATGAAGACT ATGTAAAGGC TTTAAATTTT TCGGAAGAAA GAACTCTGGG TATAAACGCT
CTGGTTTATC CCGATGAAGA AGCCGCCCTC GCTGTGATTC AAGCTATCGA ACACGGAGCA
GTCAGTGATA TTCTATCCTT TGAGAATTCA AGCTATGAAC TTTCCCGATT TAATGTTTGC
GAAAAAAGCA CTCTGGACGG TCTTGCCGTT TTTGATATCA GAAAATATGT TGACATTCCC
TTCATAGTTG TAAGTGTTGA GCAAAACGGA AAAAATAGAA TTCCGTCAGG CGATACTATT
TTAACGGCAG GAACACGGGT TTCAATTTTA ACAAAGCCGG AGCATATAAA AAGATTTTAT
GAATTGTCAG GCTTCGAAAC TCAAGAATTT AAAAAAATTG CCTTGGTAGG AATGGGCCGA
ATAGGAAAAA GCATTGCGGA ATACTTGCTT AAAAATTCAA AAGGAAAATC TTTTCTTTCA
AAACTTTTGC CGATAAATCT AAATCAAAAA TGGAAGATTT CCATTATCGA GACCAATGAT
AAAAAGGCAA AGGAAGTCGC TGCCGAATTC CCCGAAGCTT CTATCTATAA AGCCGATGTT
ACAGACGAAT CCTTTGTAGA CGAAATAGGC CTTGACTCAT TCGACTTGGT AATATGCACA
ACACCGAACT ATGAATTTAA TATGATTGCC TGTGCATACT TAAAAACCCT TGGTGTTTAT
AAAACGATAT CCCTCGTTCA AAGTGCCGTA CTCGAAAATG TTGCATATAA GATCGGTGTC
GATGTTGCAG TTTCTTTTAA GGATGTAGTT GTAGATTCTA TAATGAGTCA TCTTGTAAGC
GAAAACGTAA CAAGCGTTCA TACAATGGGT GACGGTAAAC TTGAAATAAT AGAACTGCAG
GTTTCCGAAA AGAGTCCTGT TCTCGGACAA AAACTAAAAG ATATATCTCA GCATGGAGTC
TATCTTGTTC TTCTTGTTAC GGATGAAAAC GGCGAACAGA TTCCTACCGG AGATACGGAG
GTCAAGGCCG GATATAAAAT TGTCTTTATA GTAAAATCTT CGAGAAGCGA CGAAATTATA
AAAATATTCG GAGGCAATTA G
 
Protein sequence
MKIIIVGGGV TGSELARRLI RKKHDVVLIE RDEETARHAA NRLDCMVVQA AGNDTQILLD 
AGIKKAEAMI AVTDSDELNM IICGIADSLA PQVIKIARVR NEDYVKALNF SEERTLGINA
LVYPDEEAAL AVIQAIEHGA VSDILSFENS SYELSRFNVC EKSTLDGLAV FDIRKYVDIP
FIVVSVEQNG KNRIPSGDTI LTAGTRVSIL TKPEHIKRFY ELSGFETQEF KKIALVGMGR
IGKSIAEYLL KNSKGKSFLS KLLPINLNQK WKISIIETND KKAKEVAAEF PEASIYKADV
TDESFVDEIG LDSFDLVICT TPNYEFNMIA CAYLKTLGVY KTISLVQSAV LENVAYKIGV
DVAVSFKDVV VDSIMSHLVS ENVTSVHTMG DGKLEIIELQ VSEKSPVLGQ KLKDISQHGV
YLVLLVTDEN GEQIPTGDTE VKAGYKIVFI VKSSRSDEII KIFGGN