Gene TDE0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0081 
Symbol 
ID2741696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp92643 
End bp94031 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content36% 
IMG OID637158951 
Producthypothetical protein 
Protein accessionNP_970698 
Protein GI42525600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC AAAATAAACC ATTTTACGAA AAGTTTGTAA AGAAGAATGA GACAAAAATT 
CATCATCAAA AAAAGAAAGA AATTGATGAA CCCCTGACCA AAGAAAAGAG GTCTGAAAAG
AAAAATAATC GGGAAGAGTT TCCGGTAAAG ATTGTAAAGA CAAAAAATAC CGGCAAAAAT
ATTTTTAAAG AAAATGATGC GGACACAAAG GCTCTTTTAA ATTCCTTTGA TTTAATAATA
AAGGATGCTC TAAAACTTTC TTCAAAACAA ACTGCTTCGG TTCCAAAGGA TATCCGTATC
TTATTCCATG AACTTACAAA TGAAAGAGGC TCGCGAAAAG TAAATTACCT AAACAATCCC
GTAAAATTAA CGGCCTATAT TTACCACTAT ATGTGGTGGA ACTTGGTGCG TATTTCAAAA
TTGATAGGTA ATCTTGATTT TGATTTAAAG GACGGAGACA TAATTGCAGA CTTCGGCTGC
GGGCCCATGA CCCTTATGTG TGCTTTTTGG ATTGCCAAGC CTGAATTGCG CTCAAAAAAA
CTTCATTGGT ATTGTGCCGA TATTTCGGGG AAGGCTTTGG CGGCAGGAGA AGCTTTGTTT
AATTCTCTTT TTGCTTTTAC AAATCAAAAT GCCGGAATAA AGCAAGCATC TAATTGGAAG
CTTACAAAGT TAAATGGCAG TTTCGGCCTT CCTTTAAAAG AAAAGGTAAA CCTTTTTGTA
AGTGCAAATA TGTTTAACGA AATATTTTGG GATTCTTCAA TTAAAATTGA AGGAGAAGCT
GAAAGAGCTG CAAGAACCAT TAGGCATTAT CTTCAAAAGG ATGGAGCCGC TTTGATAATT
GAGCCCGGCA TTCCCCTTGC AGGCGAATTC GTTTCGACCT TGCGTAAAAA CTTTATCGAA
AAAAAATATA AAATAATTTC GCCCTGTCCA CATGCAGAAA TCTGTCCTAT CCCCGGGAAA
AAAACGGCTG AACAAAAAAA TATAAAATAT CCTATAGCCT CGGATAAATG GTGTCATTTT
TCTTTTTATG CAGATGATGC TCCTCCAAAA CTTTTTGAGC TTTCTGAAGC GGCAAGACTC
GAAAAGACCA GAGCAAGCCT TTCTTTTATA TATTGCAGAG GAGAAGAAAA AAAAGAAAAG
CCGGTTGAGT CTAAAAAGGA AAAAAAAGAC TTCCTTGCAC GTATAAGCTC CGAAATAATA
AAACTTGACG ATGGAAAGAT CGGCCGTTAT GCTTGTTCCG AAAAGGGCTT TTTACTTTTA
ACCGAAAAAA AAGGCCCAAG GTCAAAGCTT AAAGAATATG TAGACGGCTC TCTTATAAAA
ATTGAAGACG AAAAAATAAA CCGGTTCTTC CATGACAGAA AAACCGGTGC TTTGATTATA
AGAGTTTAG
 
Protein sequence
MTEQNKPFYE KFVKKNETKI HHQKKKEIDE PLTKEKRSEK KNNREEFPVK IVKTKNTGKN 
IFKENDADTK ALLNSFDLII KDALKLSSKQ TASVPKDIRI LFHELTNERG SRKVNYLNNP
VKLTAYIYHY MWWNLVRISK LIGNLDFDLK DGDIIADFGC GPMTLMCAFW IAKPELRSKK
LHWYCADISG KALAAGEALF NSLFAFTNQN AGIKQASNWK LTKLNGSFGL PLKEKVNLFV
SANMFNEIFW DSSIKIEGEA ERAARTIRHY LQKDGAALII EPGIPLAGEF VSTLRKNFIE
KKYKIISPCP HAEICPIPGK KTAEQKNIKY PIASDKWCHF SFYADDAPPK LFELSEAARL
EKTRASLSFI YCRGEEKKEK PVESKKEKKD FLARISSEII KLDDGKIGRY ACSEKGFLLL
TEKKGPRSKL KEYVDGSLIK IEDEKINRFF HDRKTGALII RV