Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0074 |
Symbol | |
ID | 2741689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 84246 |
End bp | 85589 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637158944 |
Product | amino acid permease family protein |
Protein accession | NP_970691 |
Protein GI | 42525593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAGAAAACGA AAAATTGGGT TTAGGCTCAT GTGTAACTAT TCTTGTCGGA GGCTGTATCG GAAGTGCTAT CTTTTCGCTT TCAGGTATGA CTATGTATTA TGCGGGGCCC GCAGCTCTGA TTACATGGTT TGTTGCTGCC TTGATTTTAG GCTTGTATGG GATTCAGGTT GCTGAACTAT CAATTCGATA TCCTAAATCG GGAGGTGTAT TTGTATTTCC TGCAAAAGCA ATGGGTAAAA ATGAGCGTGA AGGAAAAGTA TGGGGATTTA TTTCTGCTTG GGGCTATGTT ATTTCCAATA TAATTGCAGT AGCTTTCTCA GCTATTTATG TAGCTGTATA CTTGGGAGTC GGTTTTCAAG CTCTAGCCGG ATTTAGAATC CCATTGGCAA TTATTTCTAT TGTTATATGT ACGGCTCTTA ACTTAATAAA AGTTACAAGT GCAGGAAAGT ACAATAATGT GTTGGTAGCT TTACTTGTGA TAACAATGCT CACTTTTGTA AGTATTGCTA TGTTTGCCGG TAGATGGAAT CCTCAAAACA TGGTTCCTTT TTTTACACAA GGTGCTAAAG GAGTAGCCGG TTTTATTCAA GCTATTCCTA ATGCTATGGT TGGGTATGGC TCTGTAGTAG CCATTGCCTT CATGGTTGGA GAAGTAGAAA ATCCAAATCG AACAGTTCCT AAATCGTTAG CTATCTCTCT TATTCTTGTT GTTCTTTTAT ATCAACTTAT GATTCTGGGA ACAATGGGAA ATATTACCAC GGAATTTTTA ATTAAGAATC CCGGTATGAG ATTTATACCT ATGTTTGCTG CAGCTTTTAC ATCTCTTAAT ATGTTCCCAT GGCTTTCAAA GCTCATTTCT ATTTCTGCAT TGCTCGCCTT ATTGACGACA ATGCTTGTTG TCGGGTTCTT AAATGCTCGT GCTGTATGTT CAATGGCAAA TGCAAAAATG CTGCCGGCAT TTTTTGGTAA AGTCAATAAA AACGGGGTTC CATCCACAGC CTGTCTTACC TTGTCAGCAT GTACAATTGT ACTAAGTTGT TTTCCAAGCA TTACAGAGTT ATTGGTAAAT TTAGGATCAA TTTCAGCAGC AATCACTATA GTTATTGTGT GTTTTTCGTT GATAGCATCT CGAAAAAAAC TACCTCATGT AGAAGGTAAT TATGCTGCTC CCGGAGGAAA TATTGTTTCA ATATTGACGA TTATTCTGAT ATTAGTTTGT TATATACCTG CTATTTTTAA TGGCAGTGTA TATATGTGGC TATTCACATT TATTTTATAT GGTATCGGCG GAATTATTAT GTTTATAATG ATGAAAAAAA ATAAGGCTGA TTAG
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Protein sequence | MKIKENEKLG LGSCVTILVG GCIGSAIFSL SGMTMYYAGP AALITWFVAA LILGLYGIQV AELSIRYPKS GGVFVFPAKA MGKNEREGKV WGFISAWGYV ISNIIAVAFS AIYVAVYLGV GFQALAGFRI PLAIISIVIC TALNLIKVTS AGKYNNVLVA LLVITMLTFV SIAMFAGRWN PQNMVPFFTQ GAKGVAGFIQ AIPNAMVGYG SVVAIAFMVG EVENPNRTVP KSLAISLILV VLLYQLMILG TMGNITTEFL IKNPGMRFIP MFAAAFTSLN MFPWLSKLIS ISALLALLTT MLVVGFLNAR AVCSMANAKM LPAFFGKVNK NGVPSTACLT LSACTIVLSC FPSITELLVN LGSISAAITI VIVCFSLIAS RKKLPHVEGN YAAPGGNIVS ILTIILILVC YIPAIFNGSV YMWLFTFILY GIGGIIMFIM MKKNKAD
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