Gene TDE0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0074 
Symbol 
ID2741689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp84246 
End bp85589 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content37% 
IMG OID637158944 
Productamino acid permease family protein 
Protein accessionNP_970691 
Protein GI42525593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AAGAAAACGA AAAATTGGGT TTAGGCTCAT GTGTAACTAT TCTTGTCGGA 
GGCTGTATCG GAAGTGCTAT CTTTTCGCTT TCAGGTATGA CTATGTATTA TGCGGGGCCC
GCAGCTCTGA TTACATGGTT TGTTGCTGCC TTGATTTTAG GCTTGTATGG GATTCAGGTT
GCTGAACTAT CAATTCGATA TCCTAAATCG GGAGGTGTAT TTGTATTTCC TGCAAAAGCA
ATGGGTAAAA ATGAGCGTGA AGGAAAAGTA TGGGGATTTA TTTCTGCTTG GGGCTATGTT
ATTTCCAATA TAATTGCAGT AGCTTTCTCA GCTATTTATG TAGCTGTATA CTTGGGAGTC
GGTTTTCAAG CTCTAGCCGG ATTTAGAATC CCATTGGCAA TTATTTCTAT TGTTATATGT
ACGGCTCTTA ACTTAATAAA AGTTACAAGT GCAGGAAAGT ACAATAATGT GTTGGTAGCT
TTACTTGTGA TAACAATGCT CACTTTTGTA AGTATTGCTA TGTTTGCCGG TAGATGGAAT
CCTCAAAACA TGGTTCCTTT TTTTACACAA GGTGCTAAAG GAGTAGCCGG TTTTATTCAA
GCTATTCCTA ATGCTATGGT TGGGTATGGC TCTGTAGTAG CCATTGCCTT CATGGTTGGA
GAAGTAGAAA ATCCAAATCG AACAGTTCCT AAATCGTTAG CTATCTCTCT TATTCTTGTT
GTTCTTTTAT ATCAACTTAT GATTCTGGGA ACAATGGGAA ATATTACCAC GGAATTTTTA
ATTAAGAATC CCGGTATGAG ATTTATACCT ATGTTTGCTG CAGCTTTTAC ATCTCTTAAT
ATGTTCCCAT GGCTTTCAAA GCTCATTTCT ATTTCTGCAT TGCTCGCCTT ATTGACGACA
ATGCTTGTTG TCGGGTTCTT AAATGCTCGT GCTGTATGTT CAATGGCAAA TGCAAAAATG
CTGCCGGCAT TTTTTGGTAA AGTCAATAAA AACGGGGTTC CATCCACAGC CTGTCTTACC
TTGTCAGCAT GTACAATTGT ACTAAGTTGT TTTCCAAGCA TTACAGAGTT ATTGGTAAAT
TTAGGATCAA TTTCAGCAGC AATCACTATA GTTATTGTGT GTTTTTCGTT GATAGCATCT
CGAAAAAAAC TACCTCATGT AGAAGGTAAT TATGCTGCTC CCGGAGGAAA TATTGTTTCA
ATATTGACGA TTATTCTGAT ATTAGTTTGT TATATACCTG CTATTTTTAA TGGCAGTGTA
TATATGTGGC TATTCACATT TATTTTATAT GGTATCGGCG GAATTATTAT GTTTATAATG
ATGAAAAAAA ATAAGGCTGA TTAG
 
Protein sequence
MKIKENEKLG LGSCVTILVG GCIGSAIFSL SGMTMYYAGP AALITWFVAA LILGLYGIQV 
AELSIRYPKS GGVFVFPAKA MGKNEREGKV WGFISAWGYV ISNIIAVAFS AIYVAVYLGV
GFQALAGFRI PLAIISIVIC TALNLIKVTS AGKYNNVLVA LLVITMLTFV SIAMFAGRWN
PQNMVPFFTQ GAKGVAGFIQ AIPNAMVGYG SVVAIAFMVG EVENPNRTVP KSLAISLILV
VLLYQLMILG TMGNITTEFL IKNPGMRFIP MFAAAFTSLN MFPWLSKLIS ISALLALLTT
MLVVGFLNAR AVCSMANAKM LPAFFGKVNK NGVPSTACLT LSACTIVLSC FPSITELLVN
LGSISAAITI VIVCFSLIAS RKKLPHVEGN YAAPGGNIVS ILTIILILVC YIPAIFNGSV
YMWLFTFILY GIGGIIMFIM MKKNKAD