Gene TDE0062 details

Gene Information

• Locus tag: TDE0062
• ID: 2741677
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 69230
• End bp: 69721
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637158932
• Product: PTS system, IIA component
• Protein accession: NP_970679
• Protein GI: 42525581
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTTA AAGATGCATT GAAACCCGAT TCTGTAGATT TAAAGGATGT TATAACTCCT 
GAAACCATTA ATCTGCACTT AAAAGGGACT ACAAAAGAAG CTATTATTGA TGAGTTACTT 
GATACGCTTG TAAAAGCCGG AAAAGTAAAG GATAGGGTTG CTACAAAGGC TTGCGTTTTA 
GATAGAGAAC GCAAGATGTC TACAGGTATG AAGCATGGCA TAGCCATACC TCATGGAAAG 
ACGGACTCTG TAAGTGATCT CGTTGCCTGT ATAGGCATTG CAGATAATCC GGTAGACTTC 
GATTCTTTGG ATCAAGAACC GGCCAGAATA TTTATTATGA CTCTTTCCCC TCTGGATAAG 
ACAGGCCCCC ACTTGCAGTT CCTTGCACAG ATAAGTTTAT TATTCAAAAG TGCAGAAAAA 
AGAGAAGAAC TTCTAAGGGC TACAAACGAA CAAGCCGTCA TCAAGCTTTT AATGGAAAGC 
GACGAAGAGT AA 

 

Protein sequence

MEFKDALKPD SVDLKDVITP ETINLHLKGT TKEAIIDELL DTLVKAGKVK DRVATKACVL 
DRERKMSTGM KHGIAIPHGK TDSVSDLVAC IGIADNPVDF DSLDQEPARI FIMTLSPLDK 
TGPHLQFLAQ ISLLFKSAEK REELLRATNE QAVIKLLMES DEE