| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0049 |
|---|
| Symbol | |
|---|
| ID | 2741664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 58289 |
|---|
| End bp | 59179 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637158919 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_970666 |
|---|
| Protein GI | 42525568 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAC TATTTAAGGT TACCCTCCGC AACGACTATG CATTTAAACG AGTCTTCGGA
GTGGAAGAAA ACAAAGATGT TCTTCAGGAT TTACTGGAAT GTATATTAGA CATTCCGTCT
GAAGACATCG CAGACTTGGA ACTTCTGGAT AAGGAGCTCC ATAAGGATTT AATAAGCGAC
AAAACAGGAG TTTTAGATGT GAAATTACGC CTAAAAAACA ATACAATTAT CGACATCGAA
ATTCAAAACA GATGGAATAG CGAGTTTGTT CAGCGTACTA TCTTTTACTG GGCTAAAATG
TATACGGAAA ACTTGAAAAC GGGCGAAGTA TATACAAAAC TGCCCAGATG TATTACAATA
AATATAGTGG GTGAAGGCTT TGATTTAAAT AATCTTATTC ACAGTGAGTA TAATGTGGTA
GAAAAGCACA TAAACGACAG GCTTTCCGAT GAGCTTGAGA TCCACTTTTT AAACTTAGCC
AAAATTAAAG AACAACAAGA AAACATTGAG CAGGATGAAA AGAAAAAGAA ACTTTACAGT
TGGTTGAAAT TTATTGAAAC TGATGATGGG GAGGTGAGGA ATATGTTAGC AGAAAACTCT
GAAATGATGG CAAAAGCCAA TACAACAATA AACATAATGG AAATGAGTCC AAAAGAGAAG
TGGCTCTATG AAAACCGAAT GAAATATGAA CATGACAAAG CCTCTTGGAA ACATATGGGT
TATCAAGAGG GAATCTTGCA GGGAGAAATA AATGGCAGAA AAGAAGGCAT TAAACAAGGA
GCCTACCAAA CTAAACTTGA AACAGCAAGA AATTTATTCC GCTTAGGGTT ATCGATTGAG
AATATAGCAG AAGTTACCGG CCTCAGCAAA GAAGAAGTGC AAAGCATTTG A
|
|---|
| Protein sequence | MKRLFKVTLR NDYAFKRVFG VEENKDVLQD LLECILDIPS EDIADLELLD KELHKDLISD
KTGVLDVKLR LKNNTIIDIE IQNRWNSEFV QRTIFYWAKM YTENLKTGEV YTKLPRCITI
NIVGEGFDLN NLIHSEYNVV EKHINDRLSD ELEIHFLNLA KIKEQQENIE QDEKKKKLYS
WLKFIETDDG EVRNMLAENS EMMAKANTTI NIMEMSPKEK WLYENRMKYE HDKASWKHMG
YQEGILQGEI NGRKEGIKQG AYQTKLETAR NLFRLGLSIE NIAEVTGLSK EEVQSI
|
|---|
| |