Gene TDE0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0039 
Symbol 
ID2741654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp44579 
End bp45763 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content35% 
IMG OID637158909 
ProductISTde1, transposase 
Protein accessionNP_970656 
Protein GI42525558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00960988 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA AATTAAATAT GGGAAAAAAG GAAAGAACAA GGGGAAAAAT ACTGGCAATG 
GTAGTAGAGC GTCAAATAAC CTTAAAACAA GCAGCCATAA AAATGCAGGT ATGTTACAGA
CAAGCAAAGC GTATTTACAA AAGGTATTTG GAACAAGGAG ATAAAGGTCT TTTGCATAAA
AGTCTAGGAA AACCTTCCTC AAAAAGAGTC GATGAAAATA TAAAGAAAAA ATGCTTGGAA
CTGTACGCTG AAAAATATCA TGATTTTGGT CCTACTCTGG CAGCAGAAAA ACTTGAAGAA
CTTGATGGGA TAAAAATAAA TCATGAAACG CTTAGGCGAT TACTAATCAA AGCAGGTCTT
TGGAGTAGAA AACGGCGAAG GAACATTCAT CGAAGTAGAA GAGAAAGAAG AGAATGTTTT
GGACAGATGC TTCAATTTGA CGGAAGTCAT CATAAATGGT TTGAGCAAAG AGGACCTAAA
TGCTGTTTAA TGAATATAGT CGATGATGCA ACAGGAATGA CACAGTCGTT TTTGACGGAA
CAAGAGACAA CGGAAGCTGC TATGAGGCTT TTATGGGGCT GGATAGACTG TCATGGGATA
CCTCAAGCGG TATGTTGTGA TAAAAAAAAT GCTTATGTTA TTACACGGGA GCCAACTATG
TCAGAAATAA TAAAAAATGT AAGGCCTAAA ACCCCGTTTC AAAAAGCTTG TGAAAAACTT
GGAATACAAA TAATAGTGGC TCATTCGGCT CAATCTAAAG GCCGTGTAGA AAGGAATCAT
AGTGTTTATC AAGACAGATT TGTAAAAGAA TTACGCCTTG CAAAAATAAA TACTATTGAA
AAGGCTAATG CTTTTTTACA AAAAGAGTAT TTACCGAAAA TAAATAAAAA GTTCGCCATT
GCACCTTTAG ACTCACAAGA TGGGCATGCT CCTTGTCCAA GTAAAGAACA GCTTGCTAAT
ATTTTCTGCT ATGAAGAACA AAGGGTTGTA AGTAATGATT TTGTTATCAG GTATGAAAAC
AGACTTTTTC AAATAACAAA ATCGAACCGT AATATACCGA GACCTAAAAC AAACATATTG
TTAAGAGAAC TCTTGGATGG AACCATAAAA CTAATATGGA ACAACAAAGA GCTTGATTTC
TTAGAAATAA CTAAAGAGTA TCTTAAGGAG GTAAAATTAT CATAA
 
Protein sequence
MEEKLNMGKK ERTRGKILAM VVERQITLKQ AAIKMQVCYR QAKRIYKRYL EQGDKGLLHK 
SLGKPSSKRV DENIKKKCLE LYAEKYHDFG PTLAAEKLEE LDGIKINHET LRRLLIKAGL
WSRKRRRNIH RSRRERRECF GQMLQFDGSH HKWFEQRGPK CCLMNIVDDA TGMTQSFLTE
QETTEAAMRL LWGWIDCHGI PQAVCCDKKN AYVITREPTM SEIIKNVRPK TPFQKACEKL
GIQIIVAHSA QSKGRVERNH SVYQDRFVKE LRLAKINTIE KANAFLQKEY LPKINKKFAI
APLDSQDGHA PCPSKEQLAN IFCYEEQRVV SNDFVIRYEN RLFQITKSNR NIPRPKTNIL
LRELLDGTIK LIWNNKELDF LEITKEYLKE VKLS