Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0039 |
Symbol | |
ID | 2741654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 44579 |
End bp | 45763 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637158909 |
Product | ISTde1, transposase |
Protein accession | NP_970656 |
Protein GI | 42525558 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00960988 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA AATTAAATAT GGGAAAAAAG GAAAGAACAA GGGGAAAAAT ACTGGCAATG GTAGTAGAGC GTCAAATAAC CTTAAAACAA GCAGCCATAA AAATGCAGGT ATGTTACAGA CAAGCAAAGC GTATTTACAA AAGGTATTTG GAACAAGGAG ATAAAGGTCT TTTGCATAAA AGTCTAGGAA AACCTTCCTC AAAAAGAGTC GATGAAAATA TAAAGAAAAA ATGCTTGGAA CTGTACGCTG AAAAATATCA TGATTTTGGT CCTACTCTGG CAGCAGAAAA ACTTGAAGAA CTTGATGGGA TAAAAATAAA TCATGAAACG CTTAGGCGAT TACTAATCAA AGCAGGTCTT TGGAGTAGAA AACGGCGAAG GAACATTCAT CGAAGTAGAA GAGAAAGAAG AGAATGTTTT GGACAGATGC TTCAATTTGA CGGAAGTCAT CATAAATGGT TTGAGCAAAG AGGACCTAAA TGCTGTTTAA TGAATATAGT CGATGATGCA ACAGGAATGA CACAGTCGTT TTTGACGGAA CAAGAGACAA CGGAAGCTGC TATGAGGCTT TTATGGGGCT GGATAGACTG TCATGGGATA CCTCAAGCGG TATGTTGTGA TAAAAAAAAT GCTTATGTTA TTACACGGGA GCCAACTATG TCAGAAATAA TAAAAAATGT AAGGCCTAAA ACCCCGTTTC AAAAAGCTTG TGAAAAACTT GGAATACAAA TAATAGTGGC TCATTCGGCT CAATCTAAAG GCCGTGTAGA AAGGAATCAT AGTGTTTATC AAGACAGATT TGTAAAAGAA TTACGCCTTG CAAAAATAAA TACTATTGAA AAGGCTAATG CTTTTTTACA AAAAGAGTAT TTACCGAAAA TAAATAAAAA GTTCGCCATT GCACCTTTAG ACTCACAAGA TGGGCATGCT CCTTGTCCAA GTAAAGAACA GCTTGCTAAT ATTTTCTGCT ATGAAGAACA AAGGGTTGTA AGTAATGATT TTGTTATCAG GTATGAAAAC AGACTTTTTC AAATAACAAA ATCGAACCGT AATATACCGA GACCTAAAAC AAACATATTG TTAAGAGAAC TCTTGGATGG AACCATAAAA CTAATATGGA ACAACAAAGA GCTTGATTTC TTAGAAATAA CTAAAGAGTA TCTTAAGGAG GTAAAATTAT CATAA
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Protein sequence | MEEKLNMGKK ERTRGKILAM VVERQITLKQ AAIKMQVCYR QAKRIYKRYL EQGDKGLLHK SLGKPSSKRV DENIKKKCLE LYAEKYHDFG PTLAAEKLEE LDGIKINHET LRRLLIKAGL WSRKRRRNIH RSRRERRECF GQMLQFDGSH HKWFEQRGPK CCLMNIVDDA TGMTQSFLTE QETTEAAMRL LWGWIDCHGI PQAVCCDKKN AYVITREPTM SEIIKNVRPK TPFQKACEKL GIQIIVAHSA QSKGRVERNH SVYQDRFVKE LRLAKINTIE KANAFLQKEY LPKINKKFAI APLDSQDGHA PCPSKEQLAN IFCYEEQRVV SNDFVIRYEN RLFQITKSNR NIPRPKTNIL LRELLDGTIK LIWNNKELDF LEITKEYLKE VKLS
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