Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0038 |
Symbol | fabF |
ID | 2741653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 43126 |
End bp | 44361 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637158908 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
Protein accession | NP_970655 |
Protein GI | 42525557 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.144038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGAG TTGTAATTAC AGGCCTCGGT GCCGTAACCC CCATAGGAAA CACCCTGGAT GAAACATGGG AAGGAATCAA AGCAGGTAAA TGCGGAATCG GAAACATTAC CCAATTTGAT TGTTCCGATT TTAAGATTCA GATAGCGGCA GAAGTAAAAA ACTTTGACGC TTCACAATTT ATGGATAAAA AAGATGCCCG TAAAATGGCG CGGTTCACTC AATTTGCCGT AGCCGCAGCT TCGCAGGCAA TGAAGGATGC CGGCCTTTCA AAAGAAAACA TCGATGCAAA CCGCACAGGT ATAATACTCG GAAACGGTAT AGGCGGTTTT GAAATCTACC AAGAAGCCTT TAAAAAATAC TTTCAAGTTG CTCCGGATCG TATTCCGCCT ATGACTGTTC CTCTTCTTAT TCCGAATGAG GCAGCCGGAA ACATAAGTAT GCAGTTCGGC ATAAAGGGAC CGTCTTGGAC ATTGGCCACG GCCTGTGCTT CCGGTACCGA TGCTCTCGGA AACGCTTTAG ACCTTGTCCG CTCAGGAAGG CTTGATGTAT GTGTATCGGG CGGTACGGAA GCTACAATTA CCGGTTTCGG CATAAGCGGT TTTACGATTT TGCAAACCCT CGCCTCAGGC GATCCTGCCA AGGCTTGCTG TCCCTTCGAT AAAAAGCGTT CAGGCTTTGT GATGGGCGAA GGCTCAGGCA TTCTCATCCT TGAAGAATAT GAACATGCAA AAAAAAGGGG AGCTAAAATA TATGCAGAAT TTGCGGGCTA TGGAGCCTCC TCCGATGCCT ACCACTTAAC CAGCCCCGAC CCCTCAGGTG ACGGAGGAGC ATTGGCTATC ACCAACGCCC TCGCCGATGC AGGCGTAAAA CCTGAAGAAG TTCAATACTA TAATGCTCAC GGAACATCGA CGCCGATTAA CGACCCTGCA GAAACGGCCA TGATTAAAAA AGCTTTTGGA GACCATGCAT ATAAAATGAA GGTTTCTTCA ACCAAATCGA TGATAGGCCA TTGCTTAGGT GCCGCAGGAG CTCTTGAAGC TATCTTCTGT ATAAAGGCAA TGGAAGAAGG ATTTTATCCC CCGACCATTA ACCTAACCGA ACCCGACCTT GAAGCCGGCT GCGATTTGGA CTATGTTCCG AACAAGGGCG TCAAAGGCGA AATAAACTGT GCCGCCTCAG GCTCTCTCGG CTTCGGAGGC CATAACGGCG TCGCCGTCTT TAAAAAGATA AAGTAA
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Protein sequence | MRRVVITGLG AVTPIGNTLD ETWEGIKAGK CGIGNITQFD CSDFKIQIAA EVKNFDASQF MDKKDARKMA RFTQFAVAAA SQAMKDAGLS KENIDANRTG IILGNGIGGF EIYQEAFKKY FQVAPDRIPP MTVPLLIPNE AAGNISMQFG IKGPSWTLAT ACASGTDALG NALDLVRSGR LDVCVSGGTE ATITGFGISG FTILQTLASG DPAKACCPFD KKRSGFVMGE GSGILILEEY EHAKKRGAKI YAEFAGYGAS SDAYHLTSPD PSGDGGALAI TNALADAGVK PEEVQYYNAH GTSTPINDPA ETAMIKKAFG DHAYKMKVSS TKSMIGHCLG AAGALEAIFC IKAMEEGFYP PTINLTEPDL EAGCDLDYVP NKGVKGEINC AASGSLGFGG HNGVAVFKKI K
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