| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0026 |
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| Symbol | |
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| ID | 2741641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 31916 |
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| End bp | 33106 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637158896 |
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| Product | TraB family protein |
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| Protein accession | NP_970643 |
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| Protein GI | 42525545 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.820387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGAAA ATAACGAAAA AACTTTAAAG CGTATTCTTT TAAAAGACCG CGAAATTATT
CTTTTAGGAA CGGCTCACGT TTCTAAAGAA AGTATTAAGG ATGTTGAATC TACAATTAGG
GAAGAAAATC CCGATTGTGT ATGTGTAGAA TTGGATGAAG TAAGGTATAA GTCCTTAACC
TCAAAAGACA CTTGGCAGCA AATCAATATC TCCCAAGTTT TACGGGAAGG AAAAGGATTT
TTACTCCTTG CAAATCTGGT TCTAGCCTCT TTTCAAAAAA AACTTGGAAG CGACCTCGGC
GTAAAACCCG GCGATGAAAT GAAGGCCGCA ATTGAAGTTT CTCAAGAACT GAATATTAAA
ACCGAAATGG TTGACCGCCC GATTCACACA ACATTAAAAA GAGCTTGGGC AAAAAACCGC
GGCTGGGGAA GATCAAAACT ATTGGCAACC CTTTTAAGTG CAGCCTTTTC AAACGAAAAA
CTTGAAGAAG CCGAAATCGA AAAATTAAAA AATCAAAGCG CAATGGATAA CATGATGCAG
GAAATGGCCG AGTATCTGCC GAACATAAAA GGCGTTTTAA TAGATGAGAG AGACCGCTAC
CTTGCATCAA AAATTTGGGA AAGCAGCGGC AAAAAAATTG TGGCTGTCTT GGGTGCAGGC
CATCTTCCCG GAACGGAACG CTTTATAAAA GAACTGGAAG CAGGTACAAA AACAACGGAT
GTATCCGACA TTGAAGTAAT TCCGCCGAAA AGCACAGTAA GCAAAATTGC CGCTTGGATA
TTTCCCATAG TTATAATAGG CTTAATCATT CTCGGCTTTT TTAAGGGAGG CGGTATAAAA
ACCGGCCAAA TGCTCTTATC CTTTGTTCTT TGGAACGGAG GACTCGCAGC GATAGGAGCC
ATTATCGCCA TGGGGCATCC TCTGGCCATC CTAGCTTCAT TTTTAGGAGC TCCATTTACA
ACGATAAACC CGTTTTTGGG TATAGGAATG ATTTCAGGCC TTGTACAGGC TTGGGCAAAA
AAGCCGCAAG TAAAAGACAT GGAAAACCTT ACACATGATG CTGGAAGCTT TTCAGGCTGG
TATAAGAACA GAATAACAAA GGTTCTTCTT GTTTTTATTC TATCTTCTCT CGGAAGCTCG
ATAGGAACAT TTATGACGGT TCCGGCTCTT ATTGCTAATC TGATTAAATA A
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| Protein sequence | MDENNEKTLK RILLKDREII LLGTAHVSKE SIKDVESTIR EENPDCVCVE LDEVRYKSLT
SKDTWQQINI SQVLREGKGF LLLANLVLAS FQKKLGSDLG VKPGDEMKAA IEVSQELNIK
TEMVDRPIHT TLKRAWAKNR GWGRSKLLAT LLSAAFSNEK LEEAEIEKLK NQSAMDNMMQ
EMAEYLPNIK GVLIDERDRY LASKIWESSG KKIVAVLGAG HLPGTERFIK ELEAGTKTTD
VSDIEVIPPK STVSKIAAWI FPIVIIGLII LGFFKGGGIK TGQMLLSFVL WNGGLAAIGA
IIAMGHPLAI LASFLGAPFT TINPFLGIGM ISGLVQAWAK KPQVKDMENL THDAGSFSGW
YKNRITKVLL VFILSSLGSS IGTFMTVPAL IANLIK
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