Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0017 |
Symbol | |
ID | 2741632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 21998 |
End bp | 23026 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637158886 |
Product | hypothetical protein |
Protein accession | NP_970634 |
Protein GI | 42525536 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1363] Cellulase M and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000301485 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTCA GATATGCTGT GGAGCTTTCA AAAGAGCTTT TACAAATACA CAGTCCCGGA GGCTATACAA AGAATGCCAT AGACCGAATA AAAAAAGAAT TCGATTCATT AGGCATAAAA TATACCGAAA CAAATAAGGG TGCTATTTAC GGCACTATCG AAGGAAAAAA TACGGCTAAA CACAGAGTTG TTTCAGCTCA CGCAGACACC CTCGGCGCTA TGGTGCGTCA AATAAAACCT AACGGCTGCT TAAAACTTGC TGCCATTGGA GGTATAGCCT TTAACAGCAT CGAAGGAGAA AATCTTTACA TCATTACAAG AACGGGAAAG GTTATCACAG GCACCGGCCT TCCCGAAAAA GCCTCTGTTC ATATTTTTGA ATCTATCGAA AAGGAAGAGC GAAACTTAGA AACCTTTGAA GTGCGCCTTG ATGCGGAAAC TCACTCAAAG GAAGAAACCT TGGCTCTCGG TATAAACATA GGCGATTTTG TCGCCTTTGA GCCACGCACA ATCGAAACCG AGGACGGCTA CATAAAATCC CGCCATCTGG ATGATAAGGC TTGTATCGGT ATGCTTTTTG CCGCTTGTAA GGCCCTTAAA GAAAAGGGAG AAAAACCGGC TTATACTACC CACTTTTTTA TAAGCAATTA TGAAGAAATA GGGCACGGCT TTTACGGTAT TCCTAAAGAA TGCTTTGAAG TTTTAGCTCT GGATATCGGA ACAGTCGGAG GTGAGCAAAA TTCGGATGAA CATGCAGTAA CAATCATCGC TAAGGATTCA CGCACACCCT ACGATTTCGG CTTTAGACAT AGGCTTGAAA ACCTTGCTAT TCAAAATAAA ATCAACTACA GAACCGATGT TATGTTTAGA TACGGCTCGG ATGCAAGTAT GTATGTATTG CAGGGATTCG ATATCAACTT TGCCTGTATG GGCCCGGGAG TAAGTGCTAC CCACCACTAT GAAAGAACCC ATATCGACTC CTACAAAGAA ACTATAAACC TATTGTACGC TTATTTAATG AGCGAATAG
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Protein sequence | MNVRYAVELS KELLQIHSPG GYTKNAIDRI KKEFDSLGIK YTETNKGAIY GTIEGKNTAK HRVVSAHADT LGAMVRQIKP NGCLKLAAIG GIAFNSIEGE NLYIITRTGK VITGTGLPEK ASVHIFESIE KEERNLETFE VRLDAETHSK EETLALGINI GDFVAFEPRT IETEDGYIKS RHLDDKACIG MLFAACKALK EKGEKPAYTT HFFISNYEEI GHGFYGIPKE CFEVLALDIG TVGGEQNSDE HAVTIIAKDS RTPYDFGFRH RLENLAIQNK INYRTDVMFR YGSDASMYVL QGFDINFACM GPGVSATHHY ERTHIDSYKE TINLLYAYLM SE
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