Gene TDE0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0011 
Symbol 
ID2741626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp15548 
End bp16195 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content43% 
IMG OID637158880 
Productperoxiredoxin 
Protein accessionNP_970628 
Protein GI42525530 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA TGACAATGAA TATGCCCCTT TTGGGAGACG ACTTCCCCCA GTTAGCGGTT 
TCGACAACAC ACGGACCTAT GAAGCTTCCC TGTGATCTTA AAGGCAGTTG GTTTGTGCTT 
TTTAGCCACC CTGCAGATTT TACACCCGTA TGTACTACGG AATTTGTAGC TTTTCAAAAG 
CTCATGCCTG AGTTTGAAAA ACTCGGCGTA AAACTAATCG GTCTTTCTAT TGACCAAATA 
CAGAGCCATT TAAAATGGAT TGAATGGATT AAGGAAAAAC TGGGTGTAGA GATTACCTTC 
CCTGTAATTG CTGCAAATGA CAGCATTGCA AACCAAATCG GACTCTTACA CCCCGGAAAA 
GGCACAAACA CCGTTCGCGC CGTATTTATT GTTGACCCCA ACGGAAAGGT AAGACTTGTT 
CTTTACTATC CTCAGGAAAT CGGTCGAAAT ATGGAAGAAA TTGTTAGAGC CGTTAAAGCT 
CTTCAAACCT CCGATAAGAA TAAGGTTGCT TTACCTGCCG ACTGGCCTAA TAACGGGCTT 
ATCAAAGACA GAGCAATCAT TCCGCCGCCT CCCACAGAAG CGGAAGCTAA AAAGCGCTTA 
AAGGAATATG ACGGTTACGA TTTCTGGTTC TGTCACAAAT CTTTATAA
 
Protein sequence
MEQMTMNMPL LGDDFPQLAV STTHGPMKLP CDLKGSWFVL FSHPADFTPV CTTEFVAFQK 
LMPEFEKLGV KLIGLSIDQI QSHLKWIEWI KEKLGVEITF PVIAANDSIA NQIGLLHPGK 
GTNTVRAVFI VDPNGKVRLV LYYPQEIGRN MEEIVRAVKA LQTSDKNKVA LPADWPNNGL 
IKDRAIIPPP PTEAEAKKRL KEYDGYDFWF CHKSL