Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0004 |
Symbol | |
ID | 2741618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 4383 |
End bp | 5057 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637158873 |
Product | hypothetical protein |
Protein accession | NP_970621 |
Protein GI | 42525523 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATA CACAAATAGA ATTCGGTTCA TATGAAAAAA GCATACATAG GTGGGGAAGA ACATGGATGG TAATAGCCAT TATAATGTTT CTTTCTTATC CTCTTTTTAC CTGTATTTAC TATAACACTT GGCCCAATTT TTGGCTCCTT TTAAGGGGAC TTTTCGGTGT TGCCGTTGTT TTTTGGCCGG TAGGAATTAT TGAAGCTTTT ACCTTCGCCC CCATGCTCGG TGCGGGCGGA ACCTATGTAG GCTTTATCAC AGGAAACTTG ACAAACCTAA AAGTGCCCTG CGGAGTCTTG GCTTTGGAGA CGGCAAAGGT TGAAGCCAAT ACCGAAGAAG GAGATGTAGT TACCACAATA GCCGTCGCAG TTTCTTCCAT TACTACAACC CTTATCTTGG TTTTGGGAAT GCTCTTATTG ACTCAGTTAA AACCAATATT GGAATCACCC ATCATGGCCC CGGCCTTTAA AAATATCTTG CCGGCCCTTT TTGGCGGCCT TCTGGTAGTC TTTGTTGCAA AAAATCCTAA GATTGCCGCA GTTCCCTTTG CCTTTATGCT GATTCTTTTT ATTGCAATGC CCCAGCTTGG AAAGGCCATA AGTATGCTAA TTCCCGTCGG GGCCGCAATT ACAATCATCT ACACAAGGAT AATGTATAAG AAAGGAAAAA TTTAA
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Protein sequence | MQDTQIEFGS YEKSIHRWGR TWMVIAIIMF LSYPLFTCIY YNTWPNFWLL LRGLFGVAVV FWPVGIIEAF TFAPMLGAGG TYVGFITGNL TNLKVPCGVL ALETAKVEAN TEEGDVVTTI AVAVSSITTT LILVLGMLLL TQLKPILESP IMAPAFKNIL PALFGGLLVV FVAKNPKIAA VPFAFMLILF IAMPQLGKAI SMLIPVGAAI TIIYTRIMYK KGKI
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