| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2221 |
|---|
| Symbol | |
|---|
| ID | 2551590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 2335566 |
|---|
| End bp | 2336900 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637150786 |
|---|
| Product | MiaB-like tRNA modifying enzyme |
|---|
| Protein accession | NP_906262 |
|---|
| Protein GI | 34541783 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000670309 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATG CTTTCATCTT TGAAAACAAA AAAGCGGCTT TCCTGACTCT TGGCTGCAAA
CTGAATTTCG CAGAGACTTC GACCATCGGA AAAGCTCTCG CCGAGCAGGG TGTGCGCCCT
GTGCGAGAGG GCGAAAAGGC CGATATATGC GTGATCAATA CATGCTCCGT AACGGAGCTG
GCCGATAAGA AATGCCGCAA TGCCATCCGC AAGTTACATA AAGAGCATCC CGGTGCGTTG
ATGATCGTCA CCGGCTGCTA TGCCCAGCTC AAACCGGAGG AAATAGCTCG AATAGACGGA
GTAGACATCG TACTGGGAGC CGATGAGAAG CTCGACCTCG TAAGTATTCT CAGCCAAAGA
CCGATACAGG GCTTTGCCGA GCAGACTATT CTCACGACCC CCACAAAGGA TATTCGCAAA
TTTCAACCCG GCTGTTCGGC GGACGACCGC ACACGCCATT TCCTCAAAGT GCAGGACGGA
TGCGACTACC ACTGCTCTTA CTGCACGATA CCCAAAGCTC GCGGACGCAG CCGAAACGGG
TCGATAGAGT CTCTCGTCCG ACAGGCTGAG GCCGTAGCCG CAGAGGGAGG AAAGGAGATC
GTACTTACGG GAGTCAATAT AGGTGACTTC GGGCGCAGTA CGGGGGAGAC ATTCCTCGAT
CTCTTGCGTG CTCTGGACCA AGTGGAAGGT ATCGAGCGAT ACCGAATCGG TTCTATCGAA
CCAAATCTCC TCTCCGACGA ACTTATTGAC TTCTGTGCCT CGGCACACCG TATTGCTCCA
CATTTCCATA TGCCGCTTCA GAGCGGATCC GACGATGTGC TCAAGCTCAT GCGCCGTCGG
TACGATACGG CTCTCTTTCG GGAGCGAGTG GAGCATATCC GCAGGGCATT GCCCCACGCC
TTCATCGGGA TAGATGTCAT TGTAGGAACG AGAGGTGAGA AACCGGAATT CTTCGAGGAT
TGCTACAGCT TCCTGCAGGA CAAGATTTCT TTCAGCCGCC TGCACGTATT CTCCTATTCG
GAGCGTCCCG GCACCCAGGC ACTGCAAATA CCTTATAAGG TAGATGCTCG CGAGAAGCAA
CGCCGTAGCC GCAGGCTGCT GGATCTGTCC GATCTTCGGC TTGCCGAGTT CTATCGCTCC
CAAGAGGGTA CGCACCGACG GGTGCTGTGG GAGGACGTTT GCCATGAAGG TCTGATGCAG
GGTTTTACGG AGAACTACAT CCGCGTAGCG GCTCCCTATG CCGCAGACTC GGTTGGTAAA
GTGGAAGAGA TCGTATTGGG CAAAACCGAT CCAAGCGGAG AATATGTGCA GACAGCCGAT
ACCATATTCC CATGA
|
|---|
| Protein sequence | MTDAFIFENK KAAFLTLGCK LNFAETSTIG KALAEQGVRP VREGEKADIC VINTCSVTEL
ADKKCRNAIR KLHKEHPGAL MIVTGCYAQL KPEEIARIDG VDIVLGADEK LDLVSILSQR
PIQGFAEQTI LTTPTKDIRK FQPGCSADDR TRHFLKVQDG CDYHCSYCTI PKARGRSRNG
SIESLVRQAE AVAAEGGKEI VLTGVNIGDF GRSTGETFLD LLRALDQVEG IERYRIGSIE
PNLLSDELID FCASAHRIAP HFHMPLQSGS DDVLKLMRRR YDTALFRERV EHIRRALPHA
FIGIDVIVGT RGEKPEFFED CYSFLQDKIS FSRLHVFSYS ERPGTQALQI PYKVDAREKQ
RRSRRLLDLS DLRLAEFYRS QEGTHRRVLW EDVCHEGLMQ GFTENYIRVA APYAADSVGK
VEEIVLGKTD PSGEYVQTAD TIFP
|
|---|
| |