Gene PG2217 details

Gene Information

• Locus tag: PG2217
• Symbol: dxs
• ID: 2551684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 2329763
• End bp: 2331667
• Gene Length: 1905 bp
• Protein Length: 634 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637150781
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: NP_906258
• Protein GI: 34541779
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.0122168
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGGAAG TCCGTCCAAC GACACTAATC GATCATATAA ATTCCCCGGC TGATCTTCGC 
GCACTAAAAC CTGAACAGTT GCCACAGGTA TGCCGCGAAC TCCGCCGCTA TATTTTGGAA 
GTGCTGTCTG TGACGCCCGG TCATCTCGGC TCCAGCTTGG GCGCAGTGGA CTTTACGGTG 
GCGCTGCACT ACGTATTCGA TACGCCCTAC GACCGTATCG TCTGGGACGT GGGACATCAG 
GCTTACAGCC ATAAGATCCT GACCGGCCGG CGCGAAGACT TCCGCCATTT GCGCCAATGG 
GGGGGCATCA GCGGTTTCCC CTCGCCTAAA GAAAGCGAAT ACGACACATT CCCTGCCGGA 
CATGCTTCCA ACTCTATCTC CGCAGCACTT GGAATGGCTG TGGCTTCGGC TGCCAAGGAT 
GAGAAACGGA AGGTCATAGC CGTCATTGGA GACGGTTCCA TGACGGGAGG TATGGCTTTT 
GAAGGGCTGA ACAATGCATC GTCTTTCCCG AACAATCTGC TGATCATCCT CAATGACAAC 
AACATGTCCA TCGACAGGAA TGTCGGAGGA CTGAACCGCT ATATGGTGGA CATCCTCACT 
AGCAAGACGT ATAATACGAT TCGTTACGAC CTTTATAAGG GCTTGCGAAA AATCAATCTG 
ATCAGCGAGA CGAACAGAAA AAATCTCCTG CGCTTCAACA ACAGCTTCAA GGCACTACTG 
GCACGCGAGA GCAATTTATT CGAAGGATTC AGCATCCGTT ATTTCGGCCC CGTCGATGGC 
AATAATGTGC TCCGCTTGGT GGAAGTACTC AATCAGATCA AGGATATGGC CGGGCCTAAG 
ATCCTGCACC TGCGAACGAT CAAAGGTAAG GGCTACTCTC CGGCCGAGAA GCAGGCTACG 
ATCTGGCATG CGCCGGGCGA ATTCGACATC AAATCGGGAG AACGTAAGAA AGGAGAGAAC 
AAGCCCGAGC CACCCAAGTT TCAGGATGTG TTCGGGCATA CACTCGTGGA GCTGGCGGAC 
AGAGACGAGC GTGTCGTCGG GGTCACCCCG GCTATGCCGA CAGGTTGCTC CATGACCTTC 
CTGATGAAGA AATACCCGAA TAGAGCCTAT GACGTGGGTA TTGCCGAAGG GCATGCAGTC 
ACGTTTTCGG CCGGTTTGGC CAAGGAAGGG TTGATTCCGT TTTGCAATAT ATACTCTTCT 
TTCATCCAGA GGGGATATGA TCAGGTGATT CATGATGTAG CCCTGTCCGG CTCACACGTG 
GTGATTTGCC TCGATCGTGC CGGTCTGGTA GGCGAGGACG GTGCCACACA CCACGGGGTG 
TTCGACATGG CTTTCCTCAG ATGCGTACCG GACATCGTCG TGGCTTCTCC GCTGAACGAA 
CACGAGCTGC GCAATCTGAT GCTGACCGCA TACAAGGGAT ATGACGGCCC GATGGTGATC 
CGTTACCCGC GTGGCAAAGG GGTGCTGACC GACTGGCGCA ACACTCCGCG ACTGGTCGAA 
ATAGCGCGAG GACGCTGTCT GACGGAGGGC GAAGCTATAG CCTTCCTCTC CATAGGCCCC 
ATAGGCAATA TGGTACAGAA AGTGGTGGAA CGGCTGGCTG AGAAAGGTGT ATCTGCAGCC 
CACTACGATA TGGTATTCCT CAAACCGCTT GACGAGGAGA TGCTCCATGG CATCGCAAAG 
AAGTTTGATA CGATCATCTC CGTCGAAGAT GGTTGCATCC AAGGCGGTTT CGGATCGGCC 
GTCATGGAGT TTATGGCAGA CCATGACTAC CACCCACGCA TCCGACGGGT GGGAGTCCCC 
GATCGCTTTA TCGGGCAGGG ATCTGTGCCC GAACAGTATG CAGACTGTGG CATGGATGCA 
GACTCTTTGT TGCACTTGAC CGAAGAACTT CTGCTGCATC CGTAG 

 

Protein sequence

MMEVRPTTLI DHINSPADLR ALKPEQLPQV CRELRRYILE VLSVTPGHLG SSLGAVDFTV 
ALHYVFDTPY DRIVWDVGHQ AYSHKILTGR REDFRHLRQW GGISGFPSPK ESEYDTFPAG 
HASNSISAAL GMAVASAAKD EKRKVIAVIG DGSMTGGMAF EGLNNASSFP NNLLIILNDN 
NMSIDRNVGG LNRYMVDILT SKTYNTIRYD LYKGLRKINL ISETNRKNLL RFNNSFKALL 
ARESNLFEGF SIRYFGPVDG NNVLRLVEVL NQIKDMAGPK ILHLRTIKGK GYSPAEKQAT 
IWHAPGEFDI KSGERKKGEN KPEPPKFQDV FGHTLVELAD RDERVVGVTP AMPTGCSMTF 
LMKKYPNRAY DVGIAEGHAV TFSAGLAKEG LIPFCNIYSS FIQRGYDQVI HDVALSGSHV 
VICLDRAGLV GEDGATHHGV FDMAFLRCVP DIVVASPLNE HELRNLMLTA YKGYDGPMVI 
RYPRGKGVLT DWRNTPRLVE IARGRCLTEG EAIAFLSIGP IGNMVQKVVE RLAEKGVSAA 
HYDMVFLKPL DEEMLHGIAK KFDTIISVED GCIQGGFGSA VMEFMADHDY HPRIRRVGVP 
DRFIGQGSVP EQYADCGMDA DSLLHLTEEL LLHP