| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2216 |
|---|
| Symbol | |
|---|
| ID | 2551647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 2327860 |
|---|
| End bp | 2329590 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637150780 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_906257 |
|---|
| Protein GI | 34541778 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0273004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGGTTCG TAAATAATTT CATAGGCCAA TGGAGGATTT TTTCCCTCCT CACATCGTTT
CGCCGACTTG GTGGTTTTTT CTCTACTTTA GCGGGCGGAA AAATTATTCG CAAGCATATT
TTTCTTCTCC CCAAACTCTT TGCTTTTTTC GCAAATGCCA AGGATCGATC GAAAAATCTC
ATTCTAAAAT CACCAATAAT TATCACCAAT ACAAGTATGA AAAGAAGCAG ACTTTTAGGC
CGCATCGTAG TACTATCTCT ATGCGTTGCC ACAATTCCGG CTTCGGCTGT CAGCCAACCG
CAGATGACGC CCTTGCAGTC GACACACACC TCCGATCGTT CGTTCGGCAG GGGAGCTCAG
CAGATAGCTG ACGAATGGAG TGCCGCCATG CCCCAAACCA CATGGAGCAG CCATGCTGAT
GTCAGTTGGT ACACGGCAGA CGGCACGGAA TTCACTCTCA CCACTGCGGA GCAGTTTGCA
GGCTTGGCCA AGCTCGTCAA CAGCGGAAAG TCCATGAAGG GTGTGACCAT CAAGCTGGGT
AATGACGTGG ACTTCTCGGC TAATCGCTTC GATGAGGTGA TCGGCAAGGA TAATGACAAC
CCCTTTTCCG GCACTTTCGA TGGAGGCAAC CATACAATAA CGGGCGTGAT GATCAGCGAT
CCCGTCTTGG GATTCATCGG ATTCTTCGGA CAAACCAACG AGGCCATTAT TCGCAATACA
ATCATCCGCA ATGCTACGGT CGTAGGTTCG GCCCCGGCAG GTGCTCTCGT TTGCAACATT
TACAACAAGG GACTCGTAAG CAACTGCCAT GCTTATGACT GTCGAATCGT TTCCGCTCCA
TACGAAACGA GCTTCGGAGG CAGTGGTGCA GGGTCTTTGG TTGGAGGCCT TTTGGATGAA
TCCAAGATAG AAAATTGCTC TGCCACTCGT GTGGAAGTCT ATAGCCAGAG CCAAAGCGGT
GCTTTCATAT CCCAGGCATA CAATCTGTGC GAAGTAAAGA ATTGCTTCGT AACGGACAGC
AAGATAATCG CAGACGTTGG GTTGATCGGT GGATTTGTCG GCATAAACTT TGCTTTCTTC
CCCGGAACCG AGTCTACTTT CTCCAACTGC TATGCTCTCA ATGTGGAAGT CGTATCGCTT
GACAGTGGTG ATCAAGCCGT TCTCGGAGGG TTTGTCGGTC AGGTATCAGC CAACTTCATT
GCCAAGCACT GCTACGTGTC AGCCAAAGTA ACGGGAGGAA AAAATCCCGG TGCTTTTGTC
GGTATGACGG CAGATGAATC CATGAACTGC AAATACGACG GTTGCTTCTA CAACAACGAA
CAAAACCCGG GTATGGTCGG CATAGGAAAC GGCGTCGAAA TACCTGCCAT CGCAGGTATG
CCGGAAGCGG CAATGAAGAC TGCCGATATG GCTGCCAAGC TCAATGCAGA TCAAAATCCT
GCTCCCTGGC TTCAGGCAAA CGACGCAAAC AACGGTTGGC CGTACCTCAA AGACAACAAA
CCGGTAATAA CCTCTCTGGC CGCTCCCATT TCCCATGAGA TCCGTATTTG GGCTACTGCC
GGTCGGATAT TCATTGCGGG TGCTCCTGCG GGCACATCTG TTCAGGTGTA CGATATGCAA
GGACATCGGA TTTACAATGC TGCCGTGCTT GCAGATCATG ACATTGCAGT TGCATCCGGT
GTATACGTTG TACGAGCCGG TGACAGCACA GCCAAAGTGA TCGTTCCCTA A
|
|---|
| Protein sequence | MWFVNNFIGQ WRIFSLLTSF RRLGGFFSTL AGGKIIRKHI FLLPKLFAFF ANAKDRSKNL
ILKSPIIITN TSMKRSRLLG RIVVLSLCVA TIPASAVSQP QMTPLQSTHT SDRSFGRGAQ
QIADEWSAAM PQTTWSSHAD VSWYTADGTE FTLTTAEQFA GLAKLVNSGK SMKGVTIKLG
NDVDFSANRF DEVIGKDNDN PFSGTFDGGN HTITGVMISD PVLGFIGFFG QTNEAIIRNT
IIRNATVVGS APAGALVCNI YNKGLVSNCH AYDCRIVSAP YETSFGGSGA GSLVGGLLDE
SKIENCSATR VEVYSQSQSG AFISQAYNLC EVKNCFVTDS KIIADVGLIG GFVGINFAFF
PGTESTFSNC YALNVEVVSL DSGDQAVLGG FVGQVSANFI AKHCYVSAKV TGGKNPGAFV
GMTADESMNC KYDGCFYNNE QNPGMVGIGN GVEIPAIAGM PEAAMKTADM AAKLNADQNP
APWLQANDAN NGWPYLKDNK PVITSLAAPI SHEIRIWATA GRIFIAGAPA GTSVQVYDMQ
GHRIYNAAVL ADHDIAVASG VYVVRAGDST AKVIVP
|
|---|
| |